RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 C5orf67F2Z3F1 127 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 PRAMEF11O60813 436 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 USP1O94782 785 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 CRYMQ14894 314 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 CASC4Q6P4E1 433 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 ZNF783Q6ZMS7 281 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 MARK2Q7KZI7 788 aaKnown RBP18.16■□□□□ 0.5
RAB39A-201ENST00000320578 ELMOD1Q8N336 334 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 DNAAF3Q8N9W5 541 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 KREMEN2Q8NCW0 462 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 PTCD2Q8WV60 388 aaKnown RBP18.16■□□□□ 0.5
RAB39A-201ENST00000320578 MYEOVQ96EZ4 313 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 TBL1YQ9BQ87 522 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 KCNK9Q9NPC2 374 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 GKN1Q9NS71 199 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 HAUS2Q9NVX0 235 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 NKIRAS1Q9NYS0 192 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 MYO18AQ92614 2054 aaKnown RBP18.16■□□□□ 0.5
RAB39A-201ENST00000320578 ILVBLA1L0T0 632 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 KRT37O76014 449 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 RB1P06400 928 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 MBL2P11226 248 aaPredicted RBP18.16■□□□□ 0.5
RAB39A-201ENST00000320578 CDC25CP30307 473 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 SLC7A9P82251 487 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 NIPAL4Q0D2K0 466 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 DNAJC3Q13217 504 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 TMCO4Q5TGY1 634 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 TMC8Q8IU68 726 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 C7orf61Q8IZ16 206 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 PPM1NQ8N819 430 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 SPPL3Q8TCT6 385 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 BCAS4Q8TDM0 211 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 DENND1AQ8TEH3 1009 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 MRPS31Q92665 395 aaKnown RBP18.16■□□□□ 0.5
RAB39A-201ENST00000320578 TADA1Q96BN2 335 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 IMP4Q96G21 291 aaKnown RBP18.16■□□□□ 0.5
RAB39A-201ENST00000320578 TCF25Q9BQ70 676 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 ARNT2Q9HBZ2 717 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 SOX13Q9UN79 622 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 TBC1D30Q9Y2I9 924 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 ZFP37Q9Y6Q3 630 aaPredicted RBP18.16■□□□□ 0.5
RAB39A-201ENST00000320578 FAM169AQ9Y6X4 670 aa18.16■□□□□ 0.5
RAB39A-201ENST00000320578 A0A1B0GVM2 712 aa18.15■□□□□ 0.5
RAB39A-201ENST00000320578 TCAF2A6NFQ2 919 aa18.15■□□□□ 0.5
RAB39A-201ENST00000320578 C2orf71A6NGG8 1288 aa18.15■□□□□ 0.5
RAB39A-201ENST00000320578 J3KR12 359 aa18.15■□□□□ 0.5
RAB39A-201ENST00000320578 GFRA2O00451 464 aa18.15■□□□□ 0.5
RAB39A-201ENST00000320578 TYROBPO43914 113 aa18.15■□□□□ 0.5
RAB39A-201ENST00000320578 KRT38O76015 456 aa18.15■□□□□ 0.5
RAB39A-201ENST00000320578 FGF19O95750 216 aa18.15■□□□□ 0.5
RAB39A-201ENST00000320578 FAM107AO95990 144 aa18.15■□□□□ 0.5
RAB39A-201ENST00000320578 GLUD1P00367 558 aa18.15■□□□□ 0.5
RAB39A-201ENST00000320578 C8AP07357 584 aa18.15■□□□□ 0.5
RAB39A-201ENST00000320578 SNRPAP09012 282 aaKnown RBP18.15■□□□□ 0.5
RAB39A-201ENST00000320578 GBP2P32456 591 aaPredicted RBP18.15■□□□□ 0.5
RAB39A-201ENST00000320578 CTNNB1P35222 781 aa18.15■□□□□ 0.5
RAB39A-201ENST00000320578 ETFBP38117 255 aa18.15■□□□□ 0.5
RAB39A-201ENST00000320578 GNA12Q03113 381 aa18.15■□□□□ 0.5
RAB39A-201ENST00000320578 MPP2Q14168 576 aa18.15■□□□□ 0.5
RAB39A-201ENST00000320578 SLC14A2Q15849 920 aa18.15■□□□□ 0.5
RAB39A-201ENST00000320578 TRMT10BQ6PF06 316 aaKnown RBP18.15■□□□□ 0.5
RAB39A-201ENST00000320578 FAM217AQ8IXS0 508 aa18.15■□□□□ 0.5
RAB39A-201ENST00000320578 KIFC1Q9BW19 673 aa18.15■□□□□ 0.5
RAB39A-201ENST00000320578 PDFQ9HBH1 243 aa18.15■□□□□ 0.5
RAB39A-201ENST00000320578 MRM3Q9HC36 420 aaKnown RBP18.15■□□□□ 0.5
RAB39A-201ENST00000320578 SMYD2Q9NRG4 433 aa18.15■□□□□ 0.5
RAB39A-201ENST00000320578 ZNF510Q9Y2H8 683 aa18.15■□□□□ 0.5
RAB39A-201ENST00000320578 ALPK3Q96L96 1907 aa18.14■□□□□ 0.5
RAB39A-201ENST00000320578 SOBPA7XYQ1 873 aa18.14■□□□□ 0.5
RAB39A-201ENST00000320578 CXorf49A8MYA2 514 aaPredicted RBP18.14■□□□□ 0.5
RAB39A-201ENST00000320578 GREM1O60565 184 aa18.14■□□□□ 0.5
RAB39A-201ENST00000320578 MT-ND3P03897 115 aa18.14■□□□□ 0.5
RAB39A-201ENST00000320578 HDCP19113 662 aa18.14■□□□□ 0.5
RAB39A-201ENST00000320578 ERVFC1P60507 584 aa18.14■□□□□ 0.5
RAB39A-201ENST00000320578 SMAD3P84022 425 aaKnown RBP18.14■□□□□ 0.5
RAB39A-201ENST00000320578 SLC18A2Q05940 514 aa18.14■□□□□ 0.5
RAB39A-201ENST00000320578 MGAT5Q09328 741 aa18.14■□□□□ 0.5
RAB39A-201ENST00000320578 RFTN1Q14699 578 aaPredicted RBP18.14■□□□□ 0.5
RAB39A-201ENST00000320578 RFWD3Q6PCD5 774 aa18.14■□□□□ 0.5
RAB39A-201ENST00000320578 POTEHQ6S545 545 aa18.14■□□□□ 0.5
RAB39A-201ENST00000320578 KDELC1Q6UW63 502 aa18.14■□□□□ 0.5
RAB39A-201ENST00000320578 RANBP10Q6VN20 620 aa18.14■□□□□ 0.5
RAB39A-201ENST00000320578 Q6ZNB5 142 aa18.14■□□□□ 0.5
RAB39A-201ENST00000320578 TIFABQ6ZNK6 161 aa18.14■□□□□ 0.5
RAB39A-201ENST00000320578 CTAGE3PQ8IX95 158 aa18.14■□□□□ 0.5
RAB39A-201ENST00000320578 PRICKLE1Q96MT3 831 aaPredicted RBP18.14■□□□□ 0.5
RAB39A-201ENST00000320578 PPANQ9NQ55 473 aaKnown RBP18.14■□□□□ 0.5
RAB39A-201ENST00000320578 NYNRINQ9P2P1 1898 aaKnown RBP18.14■□□□□ 0.49
RAB39A-201ENST00000320578 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.14■□□□□ 0.49
RAB39A-201ENST00000320578 GABRR2P28476 465 aa18.14■□□□□ 0.49
RAB39A-201ENST00000320578 SLC10A7Q0GE19 358 aa18.14■□□□□ 0.49
RAB39A-201ENST00000320578 ZNF177Q13360 481 aaPredicted RBP18.14■□□□□ 0.49
RAB39A-201ENST00000320578 LBRQ14739 615 aaKnown RBP18.14■□□□□ 0.49
RAB39A-201ENST00000320578 ANKRD20A4Q4UJ75 823 aa18.14■□□□□ 0.49
RAB39A-201ENST00000320578 PCID2Q5JVF3 399 aa18.14■□□□□ 0.49
RAB39A-201ENST00000320578 ALG1LQ6GMV1 187 aa18.14■□□□□ 0.49
RAB39A-201ENST00000320578 DENND5AQ6IQ26 1287 aa18.14■□□□□ 0.49
RAB39A-201ENST00000320578 SH2D5Q6ZV89 423 aa18.14■□□□□ 0.49
RAB39A-201ENST00000320578 GAREM2Q75VX8 874 aa18.14■□□□□ 0.49
RAB39A-201ENST00000320578 CIR1Q86X95 450 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms