RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 ARTNQ5T4W7 220 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 FYB2Q5VWT5 728 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 NLRP9Q7RTR0 991 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 MON1AQ86VX9 555 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 NUDCD3Q8IVD9 361 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 FAM126BQ8IXS8 530 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 SLC43A3Q8NBI5 491 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 TTC8Q8TAM2 541 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 PABPC5Q96DU9 382 aaKnown RBP12.65□□□□□ -0.38
RNF4-201ENST00000314289 MOCOSQ96EN8 888 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 UNKQ9C0B0 810 aaKnown RBP12.65□□□□□ -0.38
RNF4-201ENST00000314289 IARS2Q9NSE4 1012 aaKnown RBP12.65□□□□□ -0.38
RNF4-201ENST00000314289 CDY1Q9Y6F8 540 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 USH1CQ9Y6N9 552 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 KIAA0100Q14667 2235 aaKnown RBP12.65□□□□□ -0.38
RNF4-201ENST00000314289 C5orf42Q9H799 3197 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 ZCWPW2A0A1B0GU75 182 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 J3KR12 359 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 PEX11AO75192 247 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 HLA-DQB2P05538 268 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 HAPLN1P10915 354 aaPredicted RBP12.65□□□□□ -0.38
RNF4-201ENST00000314289 TYK2P29597 1187 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 TBX4P57082 545 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 NFE2Q16621 373 aaPredicted RBP12.65□□□□□ -0.38
RNF4-201ENST00000314289 ANKRD20A4Q4UJ75 823 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 TAF1BQ53T94 588 aaPredicted RBP12.65□□□□□ -0.38
RNF4-201ENST00000314289 N4BP2L1Q5TBK1 243 aaPredicted RBP12.65□□□□□ -0.38
RNF4-201ENST00000314289 FUT10Q6P4F1 479 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 TNS4Q8IZW8 715 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.65□□□□□ -0.38
RNF4-201ENST00000314289 FAM13CQ8NE31 585 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 FICDQ9BVA6 458 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.65□□□□□ -0.38
RNF4-201ENST00000314289 LRRC40Q9H9A6 602 aa12.65□□□□□ -0.38
RNF4-201ENST00000314289 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.64□□□□□ -0.39
RNF4-201ENST00000314289 ARHGEF37A1IGU5 675 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 DPPA5A6NC42 116 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 LYPLA1O75608 230 aaPredicted RBP12.64□□□□□ -0.39
RNF4-201ENST00000314289 VNN2O95498 520 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 CALB2P22676 271 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 YWHAQP27348 245 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 CYP2C18P33260 490 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 ETFBP38117 255 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 ITPRIPL1Q6GPH6 555 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 CFAP52Q8N1V2 620 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 SLC25A41Q8N5S1 370 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 DPF3Q92784 378 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 IGSF8Q969P0 613 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 HAPLN3Q96S86 360 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 BRD8Q9H0E9 1235 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 CASS4Q9NQ75 786 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.64□□□□□ -0.39
RNF4-201ENST00000314289 SLC12A8A0AV02 714 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 MTMR11A4FU01 709 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 KCNU1A8MYU2 1149 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 INPPL1O15357 1258 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 ENTPD5O75356 428 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 GSTA2P09210 222 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 SKIV2L2P42285 1042 aaKnown RBP12.64□□□□□ -0.39
RNF4-201ENST00000314289 MLLT6P55198 1093 aaPredicted RBP12.64□□□□□ -0.39
RNF4-201ENST00000314289 IRF9Q00978 393 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 MS4A13Q5J8X5 152 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 BRMS1LQ5PSV4 323 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 ANO7Q6IWH7 933 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 ZNF280DQ6N043 979 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.64□□□□□ -0.39
RNF4-201ENST00000314289 MARK2Q7KZI7 788 aaKnown RBP12.64□□□□□ -0.39
RNF4-201ENST00000314289 TTC7BQ86TV6 843 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 SERPINB11Q96P15 392 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 TSEN34Q9BSV6 310 aaKnown RBP12.64□□□□□ -0.39
RNF4-201ENST00000314289 TBC1D10AQ9BXI6 508 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 NOL6Q9H6R4 1146 aaKnown RBP12.64□□□□□ -0.39
RNF4-201ENST00000314289 CATSPERBQ9H7T0 1116 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 HEY2Q9UBP5 337 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 SLC2A6Q9UGQ3 507 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 SCML2Q9UQR0 700 aa12.64□□□□□ -0.39
RNF4-201ENST00000314289 MTO1Q9Y2Z2 717 aaKnown RBP12.64□□□□□ -0.39
RNF4-201ENST00000314289 NYNRINQ9P2P1 1898 aaKnown RBP12.63□□□□□ -0.39
RNF4-201ENST00000314289 TROVE2P10155 538 aaKnown RBP eCLIP12.63□□□□□ -0.39
RNF4-201ENST00000314289 MANEALQ5VSG8 457 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 ARID3BQ8IVW6 561 aaPredicted RBP12.63□□□□□ -0.39
RNF4-201ENST00000314289 PLD6Q8N2A8 252 aaKnown RBP12.63□□□□□ -0.39
RNF4-201ENST00000314289 DCLK2Q8N568 766 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 E2F7Q96AV8 911 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 HMCESQ96FZ2 354 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 TMEM120AQ9BXJ8 343 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 FTHL17Q9BXU8 183 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 LRMDAQ9H2I8 198 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 PRDM16Q9HAZ2 1276 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 IPO11Q9UI26 975 aaKnown RBP12.63□□□□□ -0.39
RNF4-201ENST00000314289 TRHDEQ9UKU6 1024 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 EMCNQ9ULC0 261 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 ACTL7AQ9Y615 435 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 DNAJC6O75061 913 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 GALTP07902 379 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 TPBGLP0DKB5 382 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 GNAZP19086 355 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 SERPINB3P29508 390 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 AVPR1AP37288 418 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 KCNQ1P51787 676 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms