RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 PABPC5Q96DU9 382 aaKnown RBP17.04■□□□□ 0.32
CLCF1-201ENST00000312438 ZNF419Q96HQ0 510 aaPredicted RBP17.04■□□□□ 0.32
CLCF1-201ENST00000312438 ZFRQ96KR1 1074 aaKnown RBP17.04■□□□□ 0.32
CLCF1-201ENST00000312438 SMC6Q96SB8 1091 aa17.04■□□□□ 0.32
CLCF1-201ENST00000312438 LBHD1Q9BQE6 289 aaPredicted RBP17.04■□□□□ 0.32
CLCF1-201ENST00000312438 LRRC3Q9BY71 257 aa17.04■□□□□ 0.32
CLCF1-201ENST00000312438 EPN3Q9H201 632 aa17.04■□□□□ 0.32
CLCF1-201ENST00000312438 ZNF638Q14966 1978 aaKnown RBP17.04■□□□□ 0.32
CLCF1-201ENST00000312438 FAM159BA6NKW6 160 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 IRF1P10914 325 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 SLC18A1P54219 525 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 SLC10A7Q0GE19 358 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 GAREM2Q75VX8 874 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 TRIM56Q9BRZ2 755 aaKnown RBP17.03■□□□□ 0.32
CLCF1-201ENST00000312438 HTATIP2Q9BUP3 242 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 IL22Q9GZX6 179 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 SLC25A51Q9H1U9 297 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 PPANQ9NQ55 473 aaKnown RBP17.03■□□□□ 0.32
CLCF1-201ENST00000312438 TLR9Q9NR96 1032 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 SMPD4Q9NXE4 827 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.03■□□□□ 0.32
CLCF1-201ENST00000312438 LINC01553A4QN01 128 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 HIDE1A8MVS5 230 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 CXorf49A8MYA2 514 aaPredicted RBP17.03■□□□□ 0.32
CLCF1-201ENST00000312438 H3BNC9 293 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 LPXNO60711 386 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 PRAMEF11O60813 436 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 MT-CYBP00156 380 aaPredicted RBP17.03■□□□□ 0.32
CLCF1-201ENST00000312438 GBP2P32456 591 aaPredicted RBP17.03■□□□□ 0.32
CLCF1-201ENST00000312438 RPS24P62847 133 aaKnown RBP17.03■□□□□ 0.32
CLCF1-201ENST00000312438 GNA12Q03113 381 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 ZNF177Q13360 481 aaPredicted RBP17.03■□□□□ 0.32
CLCF1-201ENST00000312438 MPP3Q13368 585 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 SPANXN3Q5MJ09 141 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 TTC39BQ5VTQ0 682 aaPredicted RBP17.03■□□□□ 0.32
CLCF1-201ENST00000312438 PLPP4Q5VZY2 271 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 ZNF449Q6P9G9 518 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 TRMT10BQ6PF06 316 aaKnown RBP17.03■□□□□ 0.32
CLCF1-201ENST00000312438 CHST9Q7L1S5 443 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 SETD3Q86TU7 594 aaPredicted RBP17.03■□□□□ 0.32
CLCF1-201ENST00000312438 TMEM135Q86UB9 458 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 TMC8Q8IU68 726 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.03■□□□□ 0.32
CLCF1-201ENST00000312438 MICAL1Q8TDZ2 1067 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 MZB1Q8WU39 189 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 CDKL2Q92772 493 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 ZNF599Q96NL3 588 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 SLC22A12Q96S37 553 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 TBL1YQ9BQ87 522 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 SSU72Q9NP77 194 aaKnown RBP17.03■□□□□ 0.32
CLCF1-201ENST00000312438 NKIRAS1Q9NYS0 192 aa17.03■□□□□ 0.32
CLCF1-201ENST00000312438 SMG5Q9UPR3 1016 aaKnown RBP17.03■□□□□ 0.32
CLCF1-201ENST00000312438 A0A1W2PPM1 405 aa17.02■□□□□ 0.31
CLCF1-201ENST00000312438 GMNCA6NCL1 334 aa17.02■□□□□ 0.31
CLCF1-201ENST00000312438 C5orf67F2Z3F1 127 aa17.02■□□□□ 0.31
CLCF1-201ENST00000312438 C1RP00736 705 aa17.02■□□□□ 0.31
CLCF1-201ENST00000312438 CDC25CP30307 473 aa17.02■□□□□ 0.31
CLCF1-201ENST00000312438 ACVRL1P37023 503 aa17.02■□□□□ 0.31
CLCF1-201ENST00000312438 CRYMQ14894 314 aa17.02■□□□□ 0.31
CLCF1-201ENST00000312438 HS6ST3Q8IZP7 471 aa17.02■□□□□ 0.31
CLCF1-201ENST00000312438 BCAS4Q8TDM0 211 aa17.02■□□□□ 0.31
CLCF1-201ENST00000312438 ATXN2LQ8WWM7 1075 aaKnown RBP17.02■□□□□ 0.31
CLCF1-201ENST00000312438 WBP2Q969T9 261 aa17.02■□□□□ 0.31
CLCF1-201ENST00000312438 IMP4Q96G21 291 aaKnown RBP17.02■□□□□ 0.31
CLCF1-201ENST00000312438 PRICKLE1Q96MT3 831 aaPredicted RBP17.02■□□□□ 0.31
CLCF1-201ENST00000312438 APOL2Q9BQE5 337 aa17.02■□□□□ 0.31
CLCF1-201ENST00000312438 ATXN3LQ9H3M9 355 aa17.02■□□□□ 0.31
CLCF1-201ENST00000312438 NT5MQ9NPB1 228 aa17.02■□□□□ 0.31
CLCF1-201ENST00000312438 SMYD2Q9NRG4 433 aa17.02■□□□□ 0.31
CLCF1-201ENST00000312438 CPQQ9Y646 472 aa17.02■□□□□ 0.31
CLCF1-201ENST00000312438 RPS6KL1Q9Y6S9 549 aa17.02■□□□□ 0.31
CLCF1-201ENST00000312438 FAM237BA0A1B0GVD1 139 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 A0A1B0GVM2 712 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 ILVBLA1L0T0 632 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 TCAF2A6NFQ2 919 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 FAM47DPA6NHR8 397 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 PRPF4O43172 522 aaKnown RBP eCLIP17.01■□□□□ 0.31
CLCF1-201ENST00000312438 KRT37O76014 449 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 MT-ND3P03897 115 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 RB1P06400 928 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 PFKLP17858 780 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 DNAJB1P25685 340 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 ADRA1AP35348 466 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 CLCN4P51793 760 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 ITKQ08881 620 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 MPP2Q14168 576 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 FRG1Q14331 258 aaKnown RBP17.01■□□□□ 0.31
CLCF1-201ENST00000312438 LBRQ14739 615 aaKnown RBP17.01■□□□□ 0.31
CLCF1-201ENST00000312438 PPM1LQ5SGD2 360 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 CERCAMQ5T4B2 595 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 CNPY4Q8N129 248 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 IPMKQ8NFU5 416 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 ALKBH8Q96BT7 664 aaKnown RBP17.01■□□□□ 0.31
CLCF1-201ENST00000312438 GCNAQ96QF7 691 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 C17orf80Q9BSJ5 609 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 VPS45Q9NRW7 570 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 TBC1D30Q9Y2I9 924 aa17.01■□□□□ 0.31
CLCF1-201ENST00000312438 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17■□□□□ 0.31
CLCF1-201ENST00000312438 A0A0D9SEW6 157 aa17■□□□□ 0.31
CLCF1-201ENST00000312438 ATP9BO43861 1147 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms