RNA–Protein interactions for RNA: ENST00000278460.11

C11orf49-201, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C11orf49, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-201ENST00000278460 CYS1Q717R9 158 aa19.86■□□□□ 0.77
C11orf49-201ENST00000278460 SPRED2Q7Z698 418 aa19.86■□□□□ 0.77
C11orf49-201ENST00000278460 LINC00523Q86TU6 105 aa19.86■□□□□ 0.77
C11orf49-201ENST00000278460 CYP4X1Q8N118 509 aa19.86■□□□□ 0.77
C11orf49-201ENST00000278460 OR52K1Q8NGK4 314 aa19.86■□□□□ 0.77
C11orf49-201ENST00000278460 GSDMBQ8TAX9 411 aa19.86■□□□□ 0.77
C11orf49-201ENST00000278460 MICAL1Q8TDZ2 1067 aa19.86■□□□□ 0.77
C11orf49-201ENST00000278460 ARNTL2Q8WYA1 636 aa19.86■□□□□ 0.77
C11orf49-201ENST00000278460 TBK1Q9UHD2 729 aa19.86■□□□□ 0.77
C11orf49-201ENST00000278460 ACTL7BQ9Y614 415 aa19.86■□□□□ 0.77
C11orf49-201ENST00000278460 TRAV19A0A0A6YYK7 116 aa19.85■□□□□ 0.77
C11orf49-201ENST00000278460 CCL16O15467 120 aa19.85■□□□□ 0.77
C11orf49-201ENST00000278460 GREM1O60565 184 aa19.85■□□□□ 0.77
C11orf49-201ENST00000278460 PRAMEF11O60813 436 aa19.85■□□□□ 0.77
C11orf49-201ENST00000278460 FGF19O95750 216 aa19.85■□□□□ 0.77
C11orf49-201ENST00000278460 HOXA9P31269 272 aa19.85■□□□□ 0.77
C11orf49-201ENST00000278460 IRS1P35568 1242 aa19.85■□□□□ 0.77
C11orf49-201ENST00000278460 MDH1P40925 334 aaKnown RBP19.85■□□□□ 0.77
C11orf49-201ENST00000278460 NPY2RP49146 381 aa19.85■□□□□ 0.77
C11orf49-201ENST00000278460 EPHA5P54756 1037 aa19.85■□□□□ 0.77
C11orf49-201ENST00000278460 GNA12Q03113 381 aa19.85■□□□□ 0.77
C11orf49-201ENST00000278460 EFTUD2Q15029 972 aaKnown RBP eCLIP19.85■□□□□ 0.77
C11orf49-201ENST00000278460 MARC1Q5VT66 337 aa19.85■□□□□ 0.77
C11orf49-201ENST00000278460 ADGRD1Q6QNK2 874 aa19.85■□□□□ 0.77
C11orf49-201ENST00000278460 ZNF354CQ86Y25 554 aa19.85■□□□□ 0.77
C11orf49-201ENST00000278460 PAFAH2Q99487 392 aa19.85■□□□□ 0.77
C11orf49-201ENST00000278460 CORO1BQ9BR76 489 aa19.85■□□□□ 0.77
C11orf49-201ENST00000278460 ATXN3LQ9H3M9 355 aa19.85■□□□□ 0.77
C11orf49-201ENST00000278460 GRXCR1A8MXD5 290 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 CSPG5O95196 566 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 CKMP06732 381 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 MYL4P12829 197 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 PGAM1P18669 254 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 ACVRL1P37023 503 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 MSH2P43246 934 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 KBTBD12Q3ZCT8 623 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 SETD3Q86TU7 594 aaPredicted RBP19.84■□□□□ 0.77
C11orf49-201ENST00000278460 FAM217AQ8IXS0 508 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 MAB21L3Q8N8X9 362 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 ZNF599Q96NL3 588 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 TGS1Q96RS0 853 aaKnown RBP19.84■□□□□ 0.77
C11orf49-201ENST00000278460 SLC25A51Q9H1U9 297 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 MAN1C1Q9NR34 630 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 SYBUQ9NX95 663 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 BFARQ9NZS9 450 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.84■□□□□ 0.77
C11orf49-201ENST00000278460 LSM7Q9UK45 103 aaKnown RBP19.84■□□□□ 0.77
C11orf49-201ENST00000278460 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.84■□□□□ 0.77
C11orf49-201ENST00000278460 A0A1W2PRU2 124 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 ILVBLA1L0T0 632 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 GFRA2O00451 464 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 CLASP2O75122 1294 aaKnown RBP19.84■□□□□ 0.77
C11orf49-201ENST00000278460 USP12O75317 370 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 CA3P07451 260 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 SGSHP51688 502 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 ZXDBP98169 803 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 SLC10A7Q0GE19 358 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 ZNF177Q13360 481 aaPredicted RBP19.84■□□□□ 0.77
C11orf49-201ENST00000278460 CASC4Q6P4E1 433 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 PRPF39Q86UA1 669 aaKnown RBP19.84■□□□□ 0.77
C11orf49-201ENST00000278460 SPATA22Q8NHS9 363 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 DCAKDQ8WVC6 231 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 SLC44A1Q8WWI5 657 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 PABPC5Q96DU9 382 aaKnown RBP19.84■□□□□ 0.77
C11orf49-201ENST00000278460 PDFQ9HBH1 243 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 UBP1Q9NZI7 540 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 ZNF510Q9Y2H8 683 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 TBC1D30Q9Y2I9 924 aa19.84■□□□□ 0.77
C11orf49-201ENST00000278460 ALDH1A2O94788 518 aa19.83■□□□□ 0.76
C11orf49-201ENST00000278460 RHOCP08134 193 aa19.83■□□□□ 0.76
C11orf49-201ENST00000278460 HNRNPA1P09651 372 aaKnown RBP eCLIP19.83■□□□□ 0.76
C11orf49-201ENST00000278460 PTPN2P17706 415 aa19.83■□□□□ 0.76
C11orf49-201ENST00000278460 DDX6P26196 483 aaKnown RBP eCLIP19.83■□□□□ 0.76
C11orf49-201ENST00000278460 HOXD9P28356 352 aaPredicted RBP19.83■□□□□ 0.76
C11orf49-201ENST00000278460 ERVK-21P61565 698 aa19.83■□□□□ 0.76
C11orf49-201ENST00000278460 CDH17Q12864 832 aa19.83■□□□□ 0.76
C11orf49-201ENST00000278460 MPP3Q13368 585 aa19.83■□□□□ 0.76
C11orf49-201ENST00000278460 OLIG2Q13516 323 aa19.83■□□□□ 0.76
C11orf49-201ENST00000278460 SHHQ15465 462 aa19.83■□□□□ 0.76
C11orf49-201ENST00000278460 TMCO4Q5TGY1 634 aa19.83■□□□□ 0.76
C11orf49-201ENST00000278460 FAM109BQ6ICB4 259 aaPredicted RBP19.83■□□□□ 0.76
C11orf49-201ENST00000278460 HTR3DQ70Z44 454 aa19.83■□□□□ 0.76
C11orf49-201ENST00000278460 TRABD2AQ86V40 505 aa19.83■□□□□ 0.76
C11orf49-201ENST00000278460 DNAAF3Q8N9W5 541 aa19.83■□□□□ 0.76
C11orf49-201ENST00000278460 TBL1YQ9BQ87 522 aa19.83■□□□□ 0.76
C11orf49-201ENST00000278460 NT5MQ9NPB1 228 aa19.83■□□□□ 0.76
C11orf49-201ENST00000278460 PIH1D1Q9NWS0 290 aaKnown RBP19.83■□□□□ 0.76
C11orf49-201ENST00000278460 MOCS1Q9NZB8 636 aa19.83■□□□□ 0.76
C11orf49-201ENST00000278460 SENP1Q9P0U3 644 aa19.83■□□□□ 0.76
C11orf49-201ENST00000278460 MYOFQ9NZM1 2061 aa19.82■□□□□ 0.76
C11orf49-201ENST00000278460 NUP210Q8TEM1 1887 aaPredicted RBP19.82■□□□□ 0.76
C11orf49-201ENST00000278460 A0A0D9SEW6 157 aa19.82■□□□□ 0.76
C11orf49-201ENST00000278460 FAM159BA6NKW6 160 aa19.82■□□□□ 0.76
C11orf49-201ENST00000278460 TSPAN3O60637 253 aa19.82■□□□□ 0.76
C11orf49-201ENST00000278460 MT-CYBP00156 380 aaPredicted RBP19.82■□□□□ 0.76
C11orf49-201ENST00000278460 GNGT1P63211 74 aa19.82■□□□□ 0.76
C11orf49-201ENST00000278460 CRADDP78560 199 aa19.82■□□□□ 0.76
C11orf49-201ENST00000278460 LBRQ14739 615 aaKnown RBP19.82■□□□□ 0.76
C11orf49-201ENST00000278460 ZNF783Q6ZMS7 281 aa19.82■□□□□ 0.76
C11orf49-201ENST00000278460 HJURPQ8NCD3 748 aaPredicted RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms