RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 TOMM70O94826 608 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 AP2A1O95782 977 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 PRDX6P30041 224 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 RANBP1P43487 201 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 ADGRE1Q14246 886 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 R3HDM1Q15032 1099 aaKnown RBP17.19■□□□□ 0.34
RTN1-201ENST00000267484 NRF1Q16656 503 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 SLC41A1Q8IVJ1 513 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 TMEM151AQ8N4L1 468 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 CELF6Q96J87 481 aaKnown RBP17.19■□□□□ 0.34
RTN1-201ENST00000267484 SNX27Q96L92 541 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 RNF39Q9H2S5 420 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 RIMS3Q9UJD0 308 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 A0A0G2JMZ2 1700 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 LRRC37A2A6NM11 1700 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 WDR90Q96KV7 1748 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 FZD9O00144 591 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 PIM1P11309 404 aaPredicted RBP17.19■□□□□ 0.34
RTN1-201ENST00000267484 HDCP19113 662 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 USP10Q14694 798 aaKnown RBP17.19■□□□□ 0.34
RTN1-201ENST00000267484 ZNF280DQ6N043 979 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 PCDH20Q8N6Y1 951 aaKnown RBP17.19■□□□□ 0.34
RTN1-201ENST00000267484 HIC2Q96JB3 615 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 MPHOSPH6Q99547 160 aaKnown RBP17.19■□□□□ 0.34
RTN1-201ENST00000267484 SHROOM3Q8TF72 1996 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.19■□□□□ 0.34
RTN1-201ENST00000267484 ADM5C9JUS6 153 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 NRP1O14786 923 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 CSPG5O95196 566 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 FGFR3P22607 806 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 ADCYAP1R1P41586 468 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 DPYSQ14117 519 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 FBXO47Q5MNV8 452 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 KLHDC10Q6PID8 442 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 ARMCX2Q7L311 632 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 CATSPER4Q7RTX7 472 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 MARVELD2Q8N4S9 558 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 BEST2Q8NFU1 509 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 PHF12Q96QT6 1004 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 OSMRQ99650 979 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 SETD4Q9NVD3 440 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 C6orf203Q9P0P8 240 aaPredicted RBP17.19■□□□□ 0.34
RTN1-201ENST00000267484 RAP2CQ9Y3L5 183 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 CSADQ9Y600 493 aa17.19■□□□□ 0.34
RTN1-201ENST00000267484 DNAJC25-GNG10A0A024R161 153 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 DCLK1O15075 740 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 PTPN1P18031 435 aaKnown RBP17.18■□□□□ 0.34
RTN1-201ENST00000267484 CTBP1Q13363 440 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 ART3Q13508 389 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 MYLK3Q32MK0 819 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 MARCH8Q5T0T0 291 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 RARS2Q5T160 578 aaKnown RBP17.18■□□□□ 0.34
RTN1-201ENST00000267484 C16orf89Q6UX73 402 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 OSTM1Q86WC4 334 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 IFNLR1Q8IU57 520 aaPredicted RBP17.18■□□□□ 0.34
RTN1-201ENST00000267484 DENND6AQ8IWF6 608 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 LSMEM2Q8N112 164 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 ISL2Q96A47 359 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 PCDHAC1Q9H158 963 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 TLK1Q9UKI8 766 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 ADAM28Q9UKQ2 775 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 TMEM114B3SHH9 223 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 MPOP05164 745 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 NUMBP49757 651 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 SOX4Q06945 474 aaPredicted RBP17.18■□□□□ 0.34
RTN1-201ENST00000267484 GK5Q6ZS86 529 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 OTOP3Q7RTS5 596 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 KDELC2Q7Z4H8 507 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 UNC93AQ86WB7 457 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 FSTL5Q8N475 847 aaPredicted RBP17.18■□□□□ 0.34
RTN1-201ENST00000267484 SERPINI1Q99574 410 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 NEMP2A6NFY4 417 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 GABRB3P28472 473 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 PPARGP37231 505 aaPredicted RBP17.18■□□□□ 0.34
RTN1-201ENST00000267484 MPP1Q00013 466 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 ZBTB6Q15916 424 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 METTL21CQ5VZV1 264 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 ZFP28Q8NHY6 868 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 ATP6V1E2Q96A05 226 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 FTHL17Q9BXU8 183 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 MAF1Q9H063 256 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 DRC3Q9H069 523 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 ADA2Q9NZK5 511 aa17.18■□□□□ 0.34
RTN1-201ENST00000267484 H3BRB1 525 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 DENRO43583 198 aaKnown RBP17.17■□□□□ 0.34
RTN1-201ENST00000267484 RNASEH2AO75792 299 aaKnown RBP17.17■□□□□ 0.34
RTN1-201ENST00000267484 CYP2C8P10632 490 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 POU5F1BQ06416 359 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 CYTH1Q15438 398 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 AMIGO2Q86SJ2 522 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 SPATA22Q8NHS9 363 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 DGCR14Q96DF8 476 aaKnown RBP17.17■□□□□ 0.34
RTN1-201ENST00000267484 NPY6RQ99463 290 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 C16orf70Q9BSU1 422 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 C1QTNF1Q9BXJ1 281 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 TUT1Q9H6E5 874 aaKnown RBP17.17■□□□□ 0.34
RTN1-201ENST00000267484 CASS4Q9NQ75 786 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 XPR1Q9UBH6 696 aa17.17■□□□□ 0.34
RTN1-201ENST00000267484 COPG1Q9Y678 874 aaKnown RBP17.17■□□□□ 0.34
RTN1-201ENST00000267484 SMIM31A0A1B0GVY4 71 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms