RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 LRRC74AQ0VAA2 488 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 WASHC5Q12768 1159 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 ADRM1Q16186 407 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 ARMC12Q5T9G4 340 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 CRELD2Q6UXH1 353 aaPredicted RBP16.97■□□□□ 0.31
PHRF1-201ENST00000264555 NIPA2Q8N8Q9 360 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 QKIQ96PU8 341 aaKnown RBP eCLIP16.97■□□□□ 0.31
PHRF1-201ENST00000264555 RNPEPL1Q9HAU8 725 aa16.97■□□□□ 0.31
PHRF1-201ENST00000264555 BTN3A1O00481 513 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 MRASO14807 208 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 KRT6AP02538 564 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 KRT6BP04259 564 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 ATP6V1B1P15313 513 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 KRT6CP48668 564 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 RAB10P61026 200 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 SP3Q02447 781 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 MAP3K10Q02779 954 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 FAM45BPQ6NSW5 357 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 ZFP1Q6P2D0 407 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 LRRC74BQ6ZQY2 392 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 FAM45AQ8TCE6 357 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 SNX15Q9NRS6 342 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 SLC17A7Q9P2U7 560 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 PAPSS1O43252 624 aaPredicted RBP16.96■□□□□ 0.31
PHRF1-201ENST00000264555 PRKAR2AP13861 404 aaKnown RBP16.96■□□□□ 0.31
PHRF1-201ENST00000264555 ZNF23P17027 643 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 KCNJ2P63252 427 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 MAD2L1Q13257 205 aaPredicted RBP16.96■□□□□ 0.31
PHRF1-201ENST00000264555 ADGRD1Q6QNK2 874 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 MIER2Q8N344 545 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 CDRT15Q96T59 188 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 HNRNPABQ99729 332 aaKnown RBP16.96■□□□□ 0.31
PHRF1-201ENST00000264555 FBXO6Q9NRD1 293 aaPredicted RBP16.96■□□□□ 0.31
PHRF1-201ENST00000264555 CARNS1A5YM72 827 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 CCNT2O60583 730 aaKnown RBP16.96■□□□□ 0.31
PHRF1-201ENST00000264555 SNUPNO95149 360 aaKnown RBP16.96■□□□□ 0.31
PHRF1-201ENST00000264555 AMHP03971 560 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 ZCCHC18P0CG32 403 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 CCDC166P0CW27 439 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 ACE2Q9BYF1 805 aaPredicted RBP16.96■□□□□ 0.31
PHRF1-201ENST00000264555 ZNF112Q9UJU3 913 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 LRCH1Q9Y2L9 728 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 SERPINB10P48595 397 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 SDE2Q6IQ49 451 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 CHADLQ6NUI6 762 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 C16orf59Q7L2K0 433 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 TDRPQ86YL5 185 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 CASP10Q92851 521 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 SDCBP2Q9H190 292 aa16.96■□□□□ 0.31
PHRF1-201ENST00000264555 BAZ2AQ9UIF9 1905 aaKnown RBP16.96■□□□□ 0.31
PHRF1-201ENST00000264555 KDM1AO60341 852 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 LGR5O75473 907 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 CENPLQ8N0S6 344 aaPredicted RBP16.95■□□□□ 0.3
PHRF1-201ENST00000264555 STAG3L4Q8TBR4 150 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 SCHIP1Q9P0W5 487 aaPredicted RBP16.95■□□□□ 0.3
PHRF1-201ENST00000264555 ENO4A6NNW6 628 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 GRIA4P48058 902 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 TEX44Q53QW1 395 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 KCTD14Q9BQ13 255 aaPredicted RBP16.95■□□□□ 0.3
PHRF1-201ENST00000264555 MRPL57Q9BQC6 102 aaKnown RBP16.95■□□□□ 0.3
PHRF1-201ENST00000264555 CIPCQ9C0C6 399 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 TMEM39AQ9NV64 488 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 TMEM59LQ9UK28 342 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 PDE5AO76074 875 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 USP1O94782 785 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 PSMG1O95456 288 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 IKBKEQ14164 716 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 SPRYD7Q5W111 196 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 ZBTB49Q6ZSB9 765 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 IRGQQ8WZA9 623 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 ALG9Q9H6U8 611 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 DPP7Q9UHL4 492 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 DOT1LQ8TEK3 1739 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 OR6C75A6NL08 312 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 ZSCAN9O15535 394 aaPredicted RBP16.95■□□□□ 0.3
PHRF1-201ENST00000264555 GUCA1CO95843 209 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 SLC2A4P14672 509 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 HK2P52789 917 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 IL2P60568 153 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 FRG1Q14331 258 aaKnown RBP16.95■□□□□ 0.3
PHRF1-201ENST00000264555 FASTKD3Q14CZ7 662 aaKnown RBP16.95■□□□□ 0.3
PHRF1-201ENST00000264555 DCAF12L1Q5VU92 463 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 SLC39A4Q6P5W5 647 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 GDPD5Q8WTR4 605 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 ZFP42Q96MM3 310 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 ZDHHC18Q9NUE0 388 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 SCN3BQ9NY72 215 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 C5orf60A6NFR6 353 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 MFSD11O43934 449 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 PAGE1O75459 146 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 GCATO75600 419 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 SERPINA6P08185 405 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 DMC1Q14565 340 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 PIWIL4Q7Z3Z4 852 aaKnown RBP16.95■□□□□ 0.3
PHRF1-201ENST00000264555 DHFR2Q86XF0 187 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 METTL6Q8TCB7 284 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 SLCO2A1Q92959 643 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 SEMA3CQ99985 751 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 CCDC167Q9P0B6 97 aa16.95■□□□□ 0.3
PHRF1-201ENST00000264555 PLLPQ9Y342 182 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms