RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 IL5RAQ01344 420 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 TRIM16LQ309B1 348 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 ZDHHC24Q6UX98 284 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 AMIGO2Q86SJ2 522 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 PTGR2Q8N8N7 351 aaPredicted RBP17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 DNAJB14Q8TBM8 379 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 KLHL5Q96PQ7 755 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 CSPG4P5Q96PW8 444 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 BBS2Q9BXC9 721 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 CAPN10Q9HC96 672 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 TBKBP1A7MCY6 615 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 ZNF839A8K0R7 811 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 TOMM70O94826 608 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 LDLRP01130 860 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 NELFEP18615 380 aaKnown RBP17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 NUP107P57740 925 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 RUNX1T1Q06455 604 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 ULK2Q8IYT8 1036 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 GPR20Q99678 358 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 SEMA3CQ99985 751 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 TM6SF2Q9BZW4 377 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 B4GALT4O60513 344 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 SPIRE1Q08AE8 756 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 SLC44A1Q8WWI5 657 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 DTNBP1Q96EV8 351 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 HGH1Q9BTY7 390 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 RAD54BQ9Y620 910 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 MGAT4DA6NG13 374 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 SEC22BO75396 215 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 ABCB1P08183 1280 aaPredicted RBP17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 CFHP08603 1231 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 PCSK9Q8NBP7 692 aaKnown RBP17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 DDHD1Q8NEL9 900 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 MIEF2Q96C03 454 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 TLCD1Q96CP7 247 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 VPS45Q9NRW7 570 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 POLG2Q9UHN1 485 aa17.38■□□□□ 0.37
SLC1A4-201ENST00000234256 LZTS3O60299 673 aaPredicted RBP17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 AXLP30530 894 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 RFX3P48380 749 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 PPIDQ08752 370 aaKnown RBP17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 SAMD4BQ5PRF9 694 aaKnown RBP17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 SH3PXD2AQ5TCZ1 1133 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 ZNF398Q8TD17 642 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 ERLEC1Q96DZ1 483 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 ANKRD27Q96NW4 1050 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 PAIP1Q9H074 479 aaKnown RBP17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 MMADHCQ9H3L0 296 aaPredicted RBP17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 CLCA2Q9UQC9 943 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 PCDHA2Q9Y5H9 948 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 TMED10P49755 219 aaKnown RBP17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 STARD3Q14849 445 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 DLK2Q6UY11 383 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 CACUL1Q86Y37 369 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 PYROXD2Q8N2H3 581 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 GLMNQ92990 594 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.37■□□□□ 0.376e-7■■■□□ 17.5
SLC1A4-201ENST00000234256 HSMCR30P0CW71 290 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 ANPEPP15144 967 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 MRPS5P82675 430 aaKnown RBP17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 C16orf72Q14CZ0 275 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 VWA5B1Q5TIE3 1220 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 RETSATQ6NUM9 610 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 NECAB2Q7Z6G3 386 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 YAF2Q8IY57 180 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 CYLDQ9NQC7 956 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 BTRCQ9Y297 605 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 ATP11BQ9Y2G3 1177 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 GSC2O15499 205 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 CYP1A1P04798 512 aaPredicted RBP17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 GDF10P55107 478 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 TXNRD3NBQ6F5E7 133 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 LBX2Q6XYB7 198 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 POLR1EQ9GZS1 481 aaKnown RBP17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 ST6GALNAC4Q9H4F1 302 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 SLC27A5Q9Y2P5 690 aa17.37■□□□□ 0.37
SLC1A4-201ENST00000234256 CILPO75339 1184 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 BPGMP07738 259 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 ADRA1BP35368 520 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 CCT8P50990 548 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 RAD23AP54725 363 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 BNIP1Q12981 228 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 FRG1Q14331 258 aaKnown RBP17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 DCAF12L1Q5VU92 463 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 RAB42Q8N4Z0 105 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 RBM15BQ8NDT2 890 aaKnown RBP17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 HDAC10Q969S8 669 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 ABCC13Q9NSE7 274 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 CCDC154A6NI56 674 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 H7C4K7 107 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 TCF4P15884 667 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 SP100P23497 879 aaPredicted RBP17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 ATP5F1P24539 256 aaPredicted RBP17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 ATXN1P54253 815 aaKnown RBP17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 JAG1P78504 1218 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 RNASEH2BQ5TBB1 312 aaKnown RBP17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 IL27RAQ6UWB1 636 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 LCLAT1Q6UWP7 414 aa17.36■□□□□ 0.37
SLC1A4-201ENST00000234256 MFSD3Q96ES6 412 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms