RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 PEX2P28328 305 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 PBX2P40425 430 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 ALKAL1Q6UXT8 129 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 SPATA24Q86W54 205 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 ICA1LQ8NDH6 482 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 PPP1R14CQ8TAE6 165 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 CXorf38Q8TB03 319 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 SLC26A7Q8TE54 656 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 DEPDC1BQ8WUY9 529 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 RXFP2Q8WXD0 754 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 CDKL2Q92772 493 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 ITFG2Q969R8 447 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 QKIQ96PU8 341 aaKnown RBP eCLIP20.95■□□□□ 0.947e-15■□□□□ 9.3
SNX3-201ENST00000230085 RPF1Q9H9Y2 349 aaKnown RBP20.95■□□□□ 0.94
SNX3-201ENST00000230085 STK39Q9UEW8 545 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 BCAP29Q9UHQ4 241 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 SIX4Q9UIU6 781 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 ADAM28Q9UKQ2 775 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 PCDHB12Q9Y5F1 795 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 CDY1Q9Y6F8 540 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 LCHNA4D1U4 455 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 HOXA2O43364 376 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 ITM2AO43736 263 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 ZNF189O75820 626 aaPredicted RBP20.95■□□□□ 0.94
SNX3-201ENST00000230085 POMCP01189 267 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 ASLP04424 464 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 DLG1Q12959 904 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 PDE1CQ14123 709 aaPredicted RBP20.95■□□□□ 0.94
SNX3-201ENST00000230085 KRT81Q14533 505 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 KYAT1Q16773 422 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 CCDC153Q494R4 210 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 N4BP2L1Q5TBK1 243 aaPredicted RBP20.95■□□□□ 0.94
SNX3-201ENST00000230085 MROH9Q5TGP6 573 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 PDPK2PQ6A1A2 396 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 LCLAT1Q6UWP7 414 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 ELOVL4Q9GZR5 314 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 SUDS3Q9H7L9 328 aaPredicted RBP20.95■□□□□ 0.94
SNX3-201ENST00000230085 HCSTQ9UBK5 93 aa20.95■□□□□ 0.94
SNX3-201ENST00000230085 C15orf38-AP3S2A0A0A6YYH1 394 aa20.94■□□□□ 0.94
SNX3-201ENST00000230085 MEI4A8MW99 385 aa20.94■□□□□ 0.94
SNX3-201ENST00000230085 TMEM114B3SHH9 223 aa20.94■□□□□ 0.94
SNX3-201ENST00000230085 H2AFYO75367 372 aaKnown RBP20.94■□□□□ 0.94
SNX3-201ENST00000230085 TMCC1O94876 653 aa20.94■□□□□ 0.94
SNX3-201ENST00000230085 PDGFRAP16234 1089 aa20.94■□□□□ 0.94
SNX3-201ENST00000230085 HSPA13P48723 471 aa20.94■□□□□ 0.94
SNX3-201ENST00000230085 SCNN1GP51170 649 aa20.94■□□□□ 0.94
SNX3-201ENST00000230085 ABCE1P61221 599 aaKnown RBP20.94■□□□□ 0.94
SNX3-201ENST00000230085 TFAMQ00059 246 aaKnown RBP20.94■□□□□ 0.94
SNX3-201ENST00000230085 NOMO2Q5JPE7 1267 aa20.94■□□□□ 0.94
SNX3-201ENST00000230085 RALGPS1Q5JS13 557 aa20.94■□□□□ 0.94
SNX3-201ENST00000230085 GLRA4Q5JXX5 417 aa20.94■□□□□ 0.94
SNX3-201ENST00000230085 PACS1Q6VY07 963 aa20.94■□□□□ 0.94
SNX3-201ENST00000230085 SCARA5Q6ZMJ2 495 aa20.94■□□□□ 0.94
SNX3-201ENST00000230085 ARPINQ7Z6K5 226 aa20.94■□□□□ 0.94
SNX3-201ENST00000230085 PQLC1Q8N2U9 271 aa20.94■□□□□ 0.94
SNX3-201ENST00000230085 SLC25A41Q8N5S1 370 aa20.94■□□□□ 0.94
SNX3-201ENST00000230085 TFB1MQ8WVM0 346 aaKnown RBP20.94■□□□□ 0.94
SNX3-201ENST00000230085 SNX27Q96L92 541 aa20.94■□□□□ 0.94
SNX3-201ENST00000230085 PBX4Q9BYU1 374 aa20.94■□□□□ 0.94
SNX3-201ENST00000230085 RBM38Q9H0Z9 239 aaKnown RBP20.94■□□□□ 0.94
SNX3-201ENST00000230085 COPG2Q9UBF2 871 aa20.94■□□□□ 0.94
SNX3-201ENST00000230085 CHD7Q9P2D1 2997 aa20.94■□□□□ 0.94
SNX3-201ENST00000230085 A0A1W2PPC1 479 aa20.93■□□□□ 0.94
SNX3-201ENST00000230085 LACTBL1A8MY62 500 aa20.93■□□□□ 0.94
SNX3-201ENST00000230085 HACD1B0YJ81 288 aa20.93■□□□□ 0.94
SNX3-201ENST00000230085 PTGESO14684 152 aa20.93■□□□□ 0.94
SNX3-201ENST00000230085 OPHN1O60890 802 aa20.93■□□□□ 0.94
SNX3-201ENST00000230085 SETSIPP0DME0 302 aa20.93■□□□□ 0.94
SNX3-201ENST00000230085 FOLH1Q04609 750 aa20.93■□□□□ 0.94
SNX3-201ENST00000230085 BTG3Q14201 252 aaPredicted RBP20.93■□□□□ 0.94
SNX3-201ENST00000230085 ADRM1Q16186 407 aa20.93■□□□□ 0.94
SNX3-201ENST00000230085 DPYSL2Q16555 572 aa20.93■□□□□ 0.94
SNX3-201ENST00000230085 C1orf228Q6PIY5 440 aa20.93■□□□□ 0.94
SNX3-201ENST00000230085 EPGNQ6UW88 154 aa20.93■□□□□ 0.94
SNX3-201ENST00000230085 DENND5BQ6ZUT9 1274 aa20.93■□□□□ 0.94
SNX3-201ENST00000230085 TMC7Q7Z402 723 aa20.93■□□□□ 0.94
SNX3-201ENST00000230085 ADCY4Q8NFM4 1077 aa20.93■□□□□ 0.94
SNX3-201ENST00000230085 SLC7A14Q8TBB6 771 aa20.93■□□□□ 0.94
SNX3-201ENST00000230085 HIC2Q96JB3 615 aa20.93■□□□□ 0.94
SNX3-201ENST00000230085 ZMAT2Q96NC0 199 aaKnown RBP20.93■□□□□ 0.94
SNX3-201ENST00000230085 MRPS26Q9BYN8 205 aaKnown RBP20.93■□□□□ 0.94
SNX3-201ENST00000230085 CNOT11Q9UKZ1 510 aaKnown RBP20.93■□□□□ 0.94
SNX3-201ENST00000230085 A0A1B0GVG6 124 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 H0YJX3 145 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 METTL18O95568 372 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 COX4I1P13073 169 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 P4HA1P13674 534 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 SCNN1AP37088 669 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 TBL3Q12788 808 aaKnown RBP20.92■□□□□ 0.94
SNX3-201ENST00000230085 TRIP10Q15642 601 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 XKR4Q5GH76 650 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 LPCAT4Q643R3 524 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 LRRC8BQ6P9F7 803 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 ZCCHC23Q6ZST2 131 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 TBC1D13Q9NVG8 400 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 YBX2Q9Y2T7 364 aaKnown RBP20.92■□□□□ 0.94
SNX3-201ENST00000230085 DTNAQ9Y4J8 743 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 TDRD15B5MCY1 1934 aaKnown RBP20.92■□□□□ 0.94
SNX3-201ENST00000230085 SMIM28A0A1B0GU29 152 aa20.92■□□□□ 0.94
SNX3-201ENST00000230085 M0QYV0 167 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms