RNA–Protein interactions for RNA: ENST00000229251.7

COPS7A-201, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-201ENST00000229251 GDAP1Q8TB36 358 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 PPP2R3CQ969Q6 453 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 TTPALQ9BTX7 342 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 KDM4CQ9H3R0 1056 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 RETREG1Q9H6L5 497 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 ACTR5Q9H9F9 607 aaPredicted RBP13.39□□□□□ -0.27
COPS7A-201ENST00000229251 CASS4Q9NQ75 786 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 FGFR1OP2Q9NVK5 253 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 BFARQ9NZS9 450 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 HSFX1Q9UBD0 423 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 AAR2Q9Y312 384 aaKnown RBP13.39□□□□□ -0.27
COPS7A-201ENST00000229251 USP15Q9Y4E8 981 aaPredicted RBP13.39□□□□□ -0.27
COPS7A-201ENST00000229251 LOC730098B7Z3J9 87 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 E9PAM4 449 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 EFEMP2O95967 443 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 HAPLN1P10915 354 aaPredicted RBP13.39□□□□□ -0.27
COPS7A-201ENST00000229251 AVPR2P30518 371 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 NPY2RP49146 381 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 IFT88Q13099 833 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 CRYMQ14894 314 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 TRIP4Q15650 581 aaPredicted RBP13.39□□□□□ -0.27
COPS7A-201ENST00000229251 DDR2Q16832 855 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 NAPEPLDQ6IQ20 393 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 RWDD4Q6NW29 188 aaKnown RBP13.39□□□□□ -0.27
COPS7A-201ENST00000229251 PRPF39Q86UA1 669 aaKnown RBP13.39□□□□□ -0.27
COPS7A-201ENST00000229251 CEP57Q86XR8 500 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 CCDC117Q8IWD4 279 aaPredicted RBP13.39□□□□□ -0.27
COPS7A-201ENST00000229251 ARHGAP12Q8IWW6 846 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 FIBCD1Q8N539 461 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 GBP7Q8N8V2 638 aaPredicted RBP13.39□□□□□ -0.27
COPS7A-201ENST00000229251 ATP6V0D2Q8N8Y2 350 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 ZSCAN18Q8TBC5 510 aaPredicted RBP13.39□□□□□ -0.27
COPS7A-201ENST00000229251 LRRC8CQ8TDW0 803 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 ACMSDQ8TDX5 336 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 MRRFQ96E11 262 aaKnown RBP13.39□□□□□ -0.27
COPS7A-201ENST00000229251 IL12RB2Q99665 862 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.39□□□□□ -0.27
COPS7A-201ENST00000229251 SFMBT1Q9UHJ3 866 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 STARD13Q9Y3M8 1113 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 BACE2Q9Y5Z0 518 aa13.39□□□□□ -0.27
COPS7A-201ENST00000229251 RIF1Q5UIP0 2472 aaKnown RBP13.38□□□□□ -0.27
COPS7A-201ENST00000229251 CHD5Q8TDI0 1954 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 IGLV3-10A0A075B6K4 115 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 ARHGAP42A6NI28 874 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 ZBTB24O43167 697 aaPredicted RBP13.38□□□□□ -0.27
COPS7A-201ENST00000229251 UPP2O95045 317 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 ZDHHC11BP0C7U3 371 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 DHRS4L1P0CG22 281 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 SRGAP2BP0DMP2 458 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 GRIA1P42261 906 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 NEK3P51956 506 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 NDST2P52849 883 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 TBX4P57082 545 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 PPARDQ03181 441 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 NIPAL4Q0D2K0 466 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 ZBTB17Q13105 803 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 CBX2Q14781 532 aaPredicted RBP13.38□□□□□ -0.27
COPS7A-201ENST00000229251 ANO4Q32M45 955 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 LACTB2Q53H82 288 aaPredicted RBP13.38□□□□□ -0.27
COPS7A-201ENST00000229251 ARTNQ5T4W7 220 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 SLC8B1Q6J4K2 584 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 CASC4Q6P4E1 433 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 LVRNQ6Q4G3 990 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 SPATA21Q7Z572 469 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 TP53INP2Q8IXH6 220 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 UMODL1-AS1Q8N2C9 162 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 MPP5Q8N3R9 675 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 DEPDC1BQ8WUY9 529 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 OVCA2Q8WZ82 227 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 FBXO32Q969P5 355 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 OXNAD1Q96HP4 312 aaPredicted RBP13.38□□□□□ -0.27
COPS7A-201ENST00000229251 BTN2A3PQ96KV6 586 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 ELAC2Q9BQ52 826 aaKnown RBP13.38□□□□□ -0.27
COPS7A-201ENST00000229251 TTLL2Q9BWV7 592 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 IL22Q9GZX6 179 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 SIK2Q9H0K1 926 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 MLXIPLQ9NP71 852 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 OSER1Q9NX31 292 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 GMIPQ9P107 970 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 HS3ST4Q9Y661 456 aa13.38□□□□□ -0.27
COPS7A-201ENST00000229251 WDR27A2RRH5 827 aa13.37□□□□□ -0.27
COPS7A-201ENST00000229251 TBKBP1A7MCY6 615 aa13.37□□□□□ -0.27
COPS7A-201ENST00000229251 TRIM49D1C9J1S8 452 aa13.37□□□□□ -0.27
COPS7A-201ENST00000229251 MATN3O15232 486 aa13.37□□□□□ -0.27
COPS7A-201ENST00000229251 MSI1O43347 362 aaKnown RBP13.37□□□□□ -0.27
COPS7A-201ENST00000229251 ANXA9O76027 345 aa13.37□□□□□ -0.27
COPS7A-201ENST00000229251 USP1O94782 785 aa13.37□□□□□ -0.27
COPS7A-201ENST00000229251 IGLV3-27P01718 113 aa13.37□□□□□ -0.27
COPS7A-201ENST00000229251 CCNB1P14635 433 aa13.37□□□□□ -0.27
COPS7A-201ENST00000229251 RHOQP17081 205 aa13.37□□□□□ -0.27
COPS7A-201ENST00000229251 MGAT1P26572 445 aa13.37□□□□□ -0.27
COPS7A-201ENST00000229251 CD68P34810 354 aaPredicted RBP13.37□□□□□ -0.27
COPS7A-201ENST00000229251 TUBP50607 506 aa13.37□□□□□ -0.27
COPS7A-201ENST00000229251 MGAT5Q09328 741 aa13.37□□□□□ -0.27
COPS7A-201ENST00000229251 ADAM15Q13444 863 aa13.37□□□□□ -0.27
COPS7A-201ENST00000229251 DBN1Q16643 649 aa13.37□□□□□ -0.27
COPS7A-201ENST00000229251 TMEM135Q86UB9 458 aa13.37□□□□□ -0.27
COPS7A-201ENST00000229251 RNF168Q8IYW5 571 aaPredicted RBP13.37□□□□□ -0.27
COPS7A-201ENST00000229251 ATAD1Q8NBU5 361 aa13.37□□□□□ -0.27
COPS7A-201ENST00000229251 PDZD8Q8NEN9 1154 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms