RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Osbpl3Q9DBS9 855 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Crb1Q8VHS2 1405 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Gm14692A2BH01 229 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Vmn2r100E9QAZ9 850 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Magee2Q52KG3 523 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Nuak2Q8BZN4 639 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Gsdmdc1Q9D8T2 487 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Robo2Q7TPD3 1470 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Gm3752A6NAT4 150 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Gm5134E9QAB5 671 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Aldh1a7O35945 501 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Aldh1a1P24549 501 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Aldh3a2P47740 484 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ephb3P54754 993 aaKnown RBP12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ubxn7Q6P5G6 467 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Fnip2Q80TD3 1108 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Olig1Q9JKN5 260 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 A0A1L1ST33 502 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Lipo2D3YY49 398 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Birc5O70201 140 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Kansl1lQ5DTI6 991 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Pik3r3Q64143 461 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Olfr412Q7TRW7 312 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Fbxo28Q8BIG4 368 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Dnajc9Q91WN1 259 aaKnown RBP12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Magea4F2Z493 315 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Gm340F6RGI3 1242 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Rasa2P58069 847 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Polr2lP62876 67 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Arhgap22Q8BL80 702 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Slitrk6Q8C110 840 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Olfr805Q8VFI4 319 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Olfr541Q8VGM0 312 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 St7Q99M96 577 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Slc24a3Q99PD7 645 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 UqcrbQ9D855 111 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Tlr5Q9JLF7 859 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Cd97Q9Z0M6 818 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Hecw2Q6I6G8 1578 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 1700003F12RikA2AKE5 210 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 TubP50586 505 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Serpinb5P70124 375 aaKnown RBP12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Serpina6Q06770 397 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Klra6Q60653 266 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Guf1Q8C3X4 651 aaKnown RBP12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Lamtor4Q8CF66 99 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Prmt5Q8CIG8 637 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Inpp4aQ9EPW0 939 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ern1Q9EQY0 977 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Kifc1Q9QWT9 674 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Mettl1Q9Z120 268 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Cyp2j12G3UXT0 502 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Gna13P27601 377 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Zfp280bQ505F4 534 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Lrrc27Q80YS5 523 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Mapkap1Q8BKH7 522 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Tmco6Q8BQX5 494 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Zbtb44Q8R0A2 453 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Pqbp1Q91VJ5 263 aaKnown RBP12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Q9D8N1 392 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 H2bfmQ9DAB5 224 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ssr3Q9DCF9 185 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 MetP16056 1379 aa12.1□□□□□ -0.47
Trim56-201ENSMUST00000054384 Gm10134F6ZQC6 126 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Cd151O35566 253 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 JundP15066 341 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Frg1P97376 258 aaKnown RBP12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Gdf10P97737 476 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Slc26a2Q62273 739 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ggnbp1Q6K1E7 370 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Q80WR5 230 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Pnma2Q8BHK0 365 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Wwp1Q8BZZ3 918 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ace2Q8R0I0 805 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Necab2Q91ZP9 389 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Cby3Q9CVN6 235 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Nudt5Q9JKX6 218 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Clcn2Q9R0A1 908 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 P2rx7Q9Z1M0 595 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Xlr5aA2BI45 236 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Vmn2r29L7N2D4 852 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Cyp2b19O55071 492 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Pgam2O70250 253 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Pknox1O70477 436 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Rab12P35283 243 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ube2e3P52483 207 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Atp13a4Q5XF90 1193 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Rsl1d1Q8BVY0 452 aaKnown RBP12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Tdrd1Q99MV1 1172 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Gemin6Q9CX53 166 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Fam111aQ9D2L9 613 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Erp27Q9D8U3 272 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Tob2Q9JM55 345 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ehbp1l1Q99MS7 1716 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Myom1Q62234 1667 aaKnown RBP12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 PfasQ5SUR0 1337 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Gm3033M0QWI0 180 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Gm3532M0QWL4 194 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 Mtnd4P03911 459 aa12.09□□□□□ -0.47
Trim56-201ENSMUST00000054384 PnmtP40935 295 aa12.09□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms