RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Ticam2Q8BJQ4 232 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Elp6Q8BK75 266 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Pak5Q8C015 719 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Sik2Q8CFH6 931 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Vmn1r206Q8R277 312 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 PlvapQ91VC4 438 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Msantd4Q91YU3 345 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Ggt7Q99JP7 662 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Eps8l2Q99K30 729 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Rrp15Q9CYX7 281 aaKnown RBP9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Mtif3Q9CZD5 276 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Arl2Q9D0J4 184 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Vps28Q9D1C8 221 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Spata9Q9D9R3 252 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Cacng3Q9JJV5 315 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 CenphQ9QYM8 241 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Phf2Q9WTU0 1096 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Mki67E9PVX6 3177 aaKnown RBP9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Il17dA0A0B4J1G4 205 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Glipr1l3A0A1W2P7V2 236 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Fam171a1A2ATK9 892 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Gm13285B1AYI3 182 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Gm13275B1AYI8 182 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Gm7275E9Q1B3 247 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Foxn2E9Q7L6 429 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Kcng2F7A6P6 480 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Psma3O70435 255 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Slc22a2O70577 553 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 CskP41241 450 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 SmoP56726 793 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Smad4P97471 551 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Pecam1Q08481 727 aaKnown RBP9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 InscQ3HNM7 579 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Lmf1Q3U3R4 574 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Bpifb5Q3UQ05 490 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Gm14685Q52KH6 695 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Lcp1Q61233 627 aaKnown RBP9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 ThrspQ62264 150 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 OcrlQ6NVF0 900 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Foxo6Q70KY4 559 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Bcas1Q80YN3 633 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Cdkn3Q810P3 211 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 H2-M10.2Q85ZW9 329 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 IfnzQ8BQT1 182 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Slc43a1Q8BSM7 564 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Bpifb6Q8BU51 449 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Gpr20Q8BYC4 358 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Gm13278Q8CD73 182 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Slc30a5Q8R4H9 761 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Sec63Q8VHE0 760 aaKnown RBP9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Fam227bQ9D518 532 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Hsd3b7Q9EQC1 369 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Mpp6Q9JLB0 553 aa9.05□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Plce1Q8K4S1 2282 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 CntrlA2AL36 2334 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Prrg1A2BFE8 218 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Gm7073E9QAS1 335 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Vmn2r86G5E8Y4 848 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Pik3cdO35904 1043 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 DxoO70348 397 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Adrb1P34971 466 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Ptpn1P35821 432 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Psma2P49722 234 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Rpl22P67984 128 aaKnown RBP9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 B3gntl1Q3U129 357 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 SynaQ5G5D5 617 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 HnrnpdQ60668 355 aaKnown RBP9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 HrQ61645 1182 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Maml1Q6T264 1020 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Sass6Q80UK7 654 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Tmem108Q8BHE4 574 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Ccdc40Q8BI79 1192 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Ano4Q8C5H1 955 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Gpr153Q8K0Z9 631 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 HpdlQ8K248 371 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Glcci1Q8K3I9 537 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Vmn1r218Q8R261 298 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 AslQ91YI0 464 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Ophn1Q99J31 802 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Grpel1Q99LP6 217 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 TMEM121BQ99MX7 572 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 MceeQ9D1I5 178 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 4930548H24RikQ9D496 437 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Spry1Q9QXV9 313 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Ror1Q9Z139 937 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Mtm1Q9Z2C5 603 aa9.04□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Wdr95D3Z7A8 784 aa9.03□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Vmn1r55E9Q8I6 310 aa9.03□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Gdap1O88741 358 aa9.03□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Cd2P08920 344 aa9.03□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Atf2P16951 487 aaKnown RBP9.03□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Prdx3P20108 257 aa9.03□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 PdgfbP31240 241 aa9.03□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Hsd17b1P51656 344 aa9.03□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Adcy8P97490 1249 aa9.03□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Zfp607aQ3TQG9 686 aa9.03□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Q3V0E1 1183 aa9.03□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Itga1Q3V3R4 1179 aa9.03□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Gm10488Q4KL05 212 aa9.03□□□□□ -0.96
Ccdc28a-201ENSMUST00000052648 Grhl3Q5FWH3 603 aa9.03□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms