RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 P3h1Q3V1T4 739 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 GpamQ61586 827 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 EfsQ64355 560 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Clec18aQ7TSQ1 534 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Alkbh8Q80Y20 664 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Map1sQ8C052 973 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 RtknQ8C6B2 564 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Fam204aQ8C6C7 236 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 HscbQ8K3A0 234 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Ubxn2aQ99KJ0 258 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Agpat3Q9D517 376 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Chmp2aQ9DB34 222 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Serpina1fQ9DCQ7 411 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 CdylQ9WTK2 593 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Ruvbl2Q9WTM5 463 aaKnown RBP13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Zswim8Q3UHH1 1832 aaKnown RBP13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Bclaf3A2AG58 752 aaKnown RBP13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Olfr1145A2AVC7 325 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Gm10720D3Z1I5 223 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Vmn2r70K7N702 854 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Psmc3O88685 442 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 P01650 108 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 P01653 108 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Abcb1bP06795 1276 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Vps4bP46467 444 aaKnown RBP13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Epb41P48193 858 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Gpr174Q3U507 335 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Fam160a1Q505K2 1081 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Gm5431Q5NCB3 844 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Nr1h2Q60644 446 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Papd5Q68ED3 633 aaKnown RBP13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Znf512Q69Z99 562 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Pcdhga7Q6DD96 935 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Rps27lQ6ZWY3 84 aaKnown RBP13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Tas2r115Q7M719 310 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Trnp1Q80ZI1 223 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Pdk1Q8BFP9 434 aaKnown RBP13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Ston2Q8BZ60 895 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Brat1Q8C3R1 822 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Vps28Q9D1C8 221 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Tmem114Q9D563 222 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 DgkeQ9R1C6 564 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Map3k6Q9WTR2 1291 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Mapk13Q9Z1B7 366 aa13.65□□□□□ -0.22
Nup88-201ENSMUST00000035283 Smim10l2aA0A0B4J1F8 78 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Daw1D3Z7A5 415 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Pot1bH7BX60 640 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Ap2a1P17426 977 aaKnown RBP13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Gabrb3P63080 473 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Pld2P97813 933 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Itga4Q00651 1039 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Q32M26 199 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Lsg1Q3UM18 644 aaKnown RBP13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Akap14Q3V0I7 536 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Ankrd13bQ5F259 626 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Dlx3Q64205 287 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Znf821Q6PD05 413 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Celf6Q7TN33 460 aaKnown RBP13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Zdhhc17Q80TN5 632 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Entpd3Q8BFW6 529 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Ptk7Q8BKG3 1062 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Arhgap28Q8BN58 729 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Grsf1Q8C5Q4 479 aaKnown RBP13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 MafaQ8CF90 359 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Alas1Q8VC19 642 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Snx9Q91VH2 595 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Pcdhb13Q91Y06 796 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Gmpr2Q99L27 348 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Spag6Q9JLI7 507 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Med20Q9R0X0 212 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 PhipQ8VDD9 1821 aaKnown RBP13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Gm28168A0A087WNP1 180 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Cyp2j12G3UXT0 502 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Olfr603L7N1Y4 312 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Tgfb2P27090 414 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Msr1P30204 458 aaKnown RBP13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 PkdccQ5RJI4 492 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Podnl1Q6P3Y9 559 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Tmem121Q80XA0 318 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Spata21Q8BHW6 681 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Iars2Q8BIJ6 1012 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Slc41a1Q8BJA2 512 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Aqp12Q8CHJ2 290 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Iqsec1Q8R0S2 961 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Smg8Q8VE18 991 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Vps11Q91W86 941 aaKnown RBP13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Sult5a1Q91X36 291 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Tbc1d15Q9CXF4 671 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Rin2Q9D684 903 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Ifrd2Q9D8U0 441 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 MecrQ9DCS3 373 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Rhox9Q9EQM5 227 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 St6galnac4Q9R2B6 360 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 B3galt4Q9Z0F0 371 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Cib1Q9Z0F4 191 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Zscan12Q9Z1D7 501 aa13.64□□□□□ -0.23
Nup88-201ENSMUST00000035283 Disp2Q8CIP5 1345 aa13.63□□□□□ -0.23
Nup88-201ENSMUST00000035283 Gm6657A0A1B0GRJ3 277 aa13.63□□□□□ -0.23
Nup88-201ENSMUST00000035283 Olfr839-ps1A0A1D5RMH6 312 aa13.63□□□□□ -0.23
Nup88-201ENSMUST00000035283 Gm7086A0A1W2P766 342 aa13.63□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms