RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 CINPQ9BW66 212 aaPredicted RBP13.25□□□□□ -0.29
PHGDH-218ENST00000641491 AP1M1Q9BXS5 423 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 ARHGEF3Q9NR81 526 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 ETNK2Q9NVF9 386 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 UBA2Q9UBT2 640 aaPredicted RBP13.25□□□□□ -0.29
PHGDH-218ENST00000641491 CA14Q9ULX7 337 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 FARP1Q9Y4F1 1045 aaPredicted RBP13.25□□□□□ -0.29
PHGDH-218ENST00000641491 NOTCH4Q99466 2003 aa13.25□□□□□ -0.29
PHGDH-218ENST00000641491 GOLGA6CA6NDK9 693 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 GOLGA6BA6NDN3 693 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 C19orf67A6NJJ6 358 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 SGK1O00141 431 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 NARSO43776 548 aaKnown RBP13.24□□□□□ -0.29
PHGDH-218ENST00000641491 KAT7O95251 611 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 MAP3K6O95382 1288 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 GOLGA6DP0CG33 693 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 RBP3P10745 1247 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 DRD1P21728 446 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 CTHP32929 405 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 CD70P32970 193 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 GARSP41250 739 aaKnown RBP13.24□□□□□ -0.29
PHGDH-218ENST00000641491 SOX9P48436 509 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 RENBPP51606 427 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 IRAK1P51617 712 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 PRKCQQ04759 706 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 ITKQ08881 620 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 XRCC4Q13426 336 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 SNX1Q13596 522 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 NOMO1Q15155 1222 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 TAZQ16635 292 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 PLEKHG6Q3KR16 790 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 ACCSLQ4AC99 568 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 SLC44A4Q53GD3 710 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 MBLAC2Q68D91 279 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 CXorf57Q6NSI4 855 aaKnown RBP13.24□□□□□ -0.29
PHGDH-218ENST00000641491 NPNTQ6UXI9 565 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 TERB1Q8NA31 727 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 ATP11CQ8NB49 1132 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 OR7D4Q8NG98 312 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 C1orf54Q8WWF1 131 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 CASKIN2Q8WXE0 1202 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 ARHGEF2Q92974 986 aaKnown RBP13.24□□□□□ -0.29
PHGDH-218ENST00000641491 MYEOVQ96EZ4 313 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 FEM1AQ9BSK4 669 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 SLC39A8Q9C0K1 460 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 GOLGA6AQ9NYA3 693 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 DTLQ9NZJ0 730 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 IPO11Q9UI26 975 aaKnown RBP13.24□□□□□ -0.29
PHGDH-218ENST00000641491 SLC27A6Q9Y2P4 619 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 ZDBF2Q9HCK1 2354 aa13.24□□□□□ -0.29
PHGDH-218ENST00000641491 DENND4CQ5VZ89 1909 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 PTPRZ1P23471 2315 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-218ENST00000641491 KCNN4O15554 427 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 KDELR3O43731 214 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 PHF2O75151 1096 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 IFNB1P01574 187 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 HLA-FP30511 346 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 CHRNA3P32297 505 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 FNTAP49354 379 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 ECT2LQ008S8 904 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 FOXK2Q01167 660 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 ZNF33AQ06730 810 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 IL10RBQ08334 325 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 SLC20A2Q08357 652 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 GALNT2Q10471 571 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 SERINC3Q13530 473 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 RFTN1Q14699 578 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-218ENST00000641491 PON2Q15165 354 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 PPP1R7Q15435 360 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 CCNG2Q16589 344 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 SLC45A4Q5BKX6 768 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 MARC1Q5VT66 337 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 ITPRIPL1Q6GPH6 555 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 RYBPQ8N488 228 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-218ENST00000641491 CCDC33Q8N5R6 958 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 NPWQ8N729 165 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 HDAC11Q96DB2 347 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 ZNF599Q96NL3 588 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 QKIQ96PU8 341 aaKnown RBP eCLIP13.23□□□□□ -0.29
PHGDH-218ENST00000641491 PHOX2BQ99453 314 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 KLHL8Q9P2G9 620 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-218ENST00000641491 SEPT3Q9UH03 358 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 NDRG2Q9UN36 371 aaKnown RBP13.23□□□□□ -0.29
PHGDH-218ENST00000641491 NEU3Q9UQ49 428 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 MRFAP1Q9Y605 127 aa13.23□□□□□ -0.29
PHGDH-218ENST00000641491 A0A0D9SEW6 157 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 GFRA2O00451 464 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 NPC1O15118 1278 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 ECEL1O95672 775 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 PECAM1P16284 738 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-218ENST00000641491 CCNCP24863 283 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 MZF1P28698 734 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-218ENST00000641491 ACVRL1P37023 503 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 HSPA9P38646 679 aaKnown RBP13.22□□□□□ -0.29
PHGDH-218ENST00000641491 TNFRSF4P43489 277 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 SLC6A11P48066 632 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 LMAN1P49257 510 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 NUMBP49757 651 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 SEC13P55735 322 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 RAD51Q06609 339 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 924.7 ms