RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 RPL14P50914 215 aaKnown RBP11.12□□□□□ -0.63
SNIP1-204ENST00000638725 MPP3Q13368 585 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 PDK1Q15118 436 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 CERCAMQ5T4B2 595 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 STRADAQ7RTN6 431 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 LCA5Q86VQ0 697 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 PGAM4Q8N0Y7 254 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 VPS39Q96JC1 886 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 ZFRQ96KR1 1074 aaKnown RBP11.12□□□□□ -0.63
SNIP1-204ENST00000638725 ZMAT2Q96NC0 199 aaKnown RBP11.12□□□□□ -0.63
SNIP1-204ENST00000638725 APOL2Q9BQE5 337 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 SENP6Q9GZR1 1112 aaPredicted RBP11.12□□□□□ -0.63
SNIP1-204ENST00000638725 TASP1Q9H6P5 420 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 SLC39A10Q9ULF5 831 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 PRSS51A0A1B0GVH4 220 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 CCDC78A2IDD5 438 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 TSPAN1O60635 241 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 TRPA1O75762 1119 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 SBK3P0C264 359 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 FAM58BPP0C7Q3 252 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 ME2P23368 584 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 BCAT1P54687 386 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 PPP2R5DQ14738 602 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 GLRA4Q5JXX5 417 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 OTUD1Q5VV17 481 aaPredicted RBP11.12□□□□□ -0.63
SNIP1-204ENST00000638725 OLFML2BQ68BL8 750 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 ARHGAP17Q68EM7 881 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 TMEM135Q86UB9 458 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 CATSPER1Q8NEC5 780 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 TMA16Q96EY4 203 aaKnown RBP11.12□□□□□ -0.63
SNIP1-204ENST00000638725 DRC3Q9H069 523 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 FAM124BQ9H5Z6 455 aaPredicted RBP11.12□□□□□ -0.63
SNIP1-204ENST00000638725 ZNF385DQ9H6B1 395 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 PDGFCQ9NRA1 345 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 IARS2Q9NSE4 1012 aaKnown RBP11.12□□□□□ -0.63
SNIP1-204ENST00000638725 BFARQ9NZS9 450 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 WDR90Q96KV7 1748 aa11.12□□□□□ -0.63
SNIP1-204ENST00000638725 PHGDHO43175 533 aaKnown RBP11.11□□□□□ -0.63
SNIP1-204ENST00000638725 H2AFYO75367 372 aaKnown RBP11.11□□□□□ -0.63
SNIP1-204ENST00000638725 TXNP10599 105 aaKnown RBP11.11□□□□□ -0.63
SNIP1-204ENST00000638725 TFEBP19484 476 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 PTPN3P26045 913 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 PCSK6P29122 969 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 NAGLUP54802 743 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 APOFQ13790 326 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 DCAF6Q58WW2 860 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 SH3D19Q5HYK7 790 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 GJC2Q5T442 439 aaPredicted RBP11.11□□□□□ -0.63
SNIP1-204ENST00000638725 AMIGO2Q86SJ2 522 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 KCNMB4Q86W47 210 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 PSTKQ8IV42 348 aaKnown RBP11.11□□□□□ -0.63
SNIP1-204ENST00000638725 ANKRD52Q8NB46 1076 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 PDCD6IPQ8WUM4 868 aaKnown RBP11.11□□□□□ -0.63
SNIP1-204ENST00000638725 NLRP7Q8WX94 980 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 C18orf25Q96B23 403 aaPredicted RBP11.11□□□□□ -0.63
SNIP1-204ENST00000638725 NPAS2Q99743 824 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 MRPL1Q9BYD6 325 aaKnown RBP11.11□□□□□ -0.63
SNIP1-204ENST00000638725 C20orf96Q9NUD7 363 aaPredicted RBP11.11□□□□□ -0.63
SNIP1-204ENST00000638725 GALNT8Q9NY28 637 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 PLK2Q9NYY3 685 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 RCOR3Q9P2K3 495 aaPredicted RBP11.11□□□□□ -0.63
SNIP1-204ENST00000638725 VPS28Q9UK41 221 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 DMTF1Q9Y222 760 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 hCG_2014768A0A024R1R8 64 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 RNASEH2AO75792 299 aaKnown RBP11.11□□□□□ -0.63
SNIP1-204ENST00000638725 AP2A1O95782 977 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 CYP2C8P10632 490 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 TPH1P17752 444 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 LMO2P25791 158 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 AVPR1AP37288 418 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 MATKP42679 507 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 SLC26A2P50443 739 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 NSUN2Q08J23 767 aaKnown RBP eCLIP11.11□□□□□ -0.63
SNIP1-204ENST00000638725 ART3Q13508 389 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 GRM3Q14832 879 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 LIPMQ5VYY2 423 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 ZYG11AQ6WRX3 759 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 IFNLR1Q8IU57 520 aaPredicted RBP11.11□□□□□ -0.63
SNIP1-204ENST00000638725 TMEM126BQ8IUX1 230 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 TMEM151AQ8N4L1 468 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 CPSF7Q8N684 471 aaKnown RBP11.11□□□□□ -0.63
SNIP1-204ENST00000638725 TMEM102Q8N9M5 508 aaPredicted RBP11.11□□□□□ -0.63
SNIP1-204ENST00000638725 SLC7A14Q8TBB6 771 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 SCYL1Q96KG9 808 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 CHRAC1Q9NRG0 131 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 CDYLQ9Y232 598 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 MCM3APO60318 1980 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 ACOT8O14734 319 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 STRNO43815 780 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 BCAS2O75934 225 aaPredicted RBP11.11□□□□□ -0.63
SNIP1-204ENST00000638725 PTPN1P18031 435 aaKnown RBP11.11□□□□□ -0.63
SNIP1-204ENST00000638725 HPCAP84074 193 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 KIZQ2M2Z5 673 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 SLC25A52Q3SY17 297 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 TMEM259Q4ZIN3 620 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 PTAR1Q7Z6K3 402 aaPredicted RBP11.11□□□□□ -0.63
SNIP1-204ENST00000638725 SETD3Q86TU7 594 aaPredicted RBP11.11□□□□□ -0.63
SNIP1-204ENST00000638725 LSMEM2Q8N112 164 aa11.11□□□□□ -0.63
SNIP1-204ENST00000638725 ZSCAN18Q8TBC5 510 aaPredicted RBP11.11□□□□□ -0.63
SNIP1-204ENST00000638725 SLC2A14Q8TDB8 520 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms