RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 APOC2P02655 101 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 HLA-FP30511 346 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 CD70P32970 193 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 CSKP41240 450 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 DGKGP49619 791 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 NDST2P52849 883 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 OXCT1P55809 520 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 GNA12Q03113 381 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 LMAN2Q12907 356 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 SLC10A2Q12908 348 aaPredicted RBP14.78□□□□□ -0.04
LINC00339-208ENST00000634934 KLF1Q13351 362 aaPredicted RBP14.78□□□□□ -0.04
LINC00339-208ENST00000634934 GAB4Q2WGN9 574 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 NAIF1Q69YI7 327 aaPredicted RBP14.78□□□□□ -0.04
LINC00339-208ENST00000634934 ASTLQ6HA08 431 aaPredicted RBP14.78□□□□□ -0.04
LINC00339-208ENST00000634934 ETFBKMTQ8IXQ9 262 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 IFT20Q8IY31 132 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 OR7D4Q8NG98 312 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 MAIP1Q8WWC4 291 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 DNASE1L2Q92874 299 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 SLC39A8Q9C0K1 460 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 FAM107BQ9H098 131 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 NOL6Q9H6R4 1146 aaKnown RBP14.78□□□□□ -0.04
LINC00339-208ENST00000634934 TRPV5Q9NQA5 729 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 HEBP1Q9NRV9 189 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 DTLQ9NZJ0 730 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 DEC1Q9P2X7 70 aa14.78□□□□□ -0.04
LINC00339-208ENST00000634934 KIF26AQ9ULI4 1882 aaPredicted RBP14.78□□□□□ -0.04
LINC00339-208ENST00000634934 R3HDM2Q9Y2K5 976 aaKnown RBP14.78□□□□□ -0.04
LINC00339-208ENST00000634934 A0A0D9SEW6 157 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 ARHGAP42A6NI28 874 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 MZF1P28698 734 aaPredicted RBP14.77□□□□□ -0.04
LINC00339-208ENST00000634934 ACVRL1P37023 503 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 NR2C2P49116 596 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 PAPOLAP51003 745 aaKnown RBP14.77□□□□□ -0.04
LINC00339-208ENST00000634934 YBEYP58557 167 aaPredicted RBP14.77□□□□□ -0.04
LINC00339-208ENST00000634934 SKOR1P84550 965 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 OTUD4Q01804 1114 aaKnown RBP14.77□□□□□ -0.04
LINC00339-208ENST00000634934 KDSRQ06136 332 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 PARP15Q460N3 678 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 AFMIDQ63HM1 303 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 IL31Q6EBC2 164 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 GRAMD4Q6IC98 578 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 ZNF783Q6ZMS7 281 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 ARHGAP12Q8IWW6 846 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 TTC13Q8NBP0 860 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 ACTL9Q8TC94 416 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 C1orf54Q8WWF1 131 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 HMCESQ96FZ2 354 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 AP1M1Q9BXS5 423 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 MAGEH1Q9H213 219 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 LRRC19Q9H756 370 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 SLC2A4RGQ9NR83 387 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 GGA2Q9UJY4 613 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 VPS28Q9UK41 221 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 PIAS3Q9Y6X2 628 aa14.77□□□□□ -0.04
LINC00339-208ENST00000634934 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.76□□□□□ -0.05
LINC00339-208ENST00000634934 SPECC1L-ADORA2AF8WAN1 911 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 KRIT1O00522 736 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 CISD3P0C7P0 127 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 PABPC1P11940 636 aaKnown RBP14.76□□□□□ -0.05
LINC00339-208ENST00000634934 MX2P20592 715 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 ETFBP38117 255 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 OPRD1P41143 372 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 TNNT3P45378 269 aaPredicted RBP14.76□□□□□ -0.05
LINC00339-208ENST00000634934 ZXDAP98168 799 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 C8orf74Q6P047 294 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 B4GALNT4Q76KP1 1039 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 BZW1Q7L1Q6 419 aaKnown RBP14.76□□□□□ -0.05
LINC00339-208ENST00000634934 SRLQ86TD4 932 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 ZC3H18Q86VM9 953 aaKnown RBP14.76□□□□□ -0.05
LINC00339-208ENST00000634934 APCDD1Q8J025 514 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 ATPAF2Q8N5M1 289 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 CCNYQ8ND76 341 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 FAM76AQ8TAV0 307 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 LRRN4Q8WUT4 740 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 ATG4AQ8WYN0 398 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 ARHGEF2Q92974 986 aaKnown RBP14.76□□□□□ -0.05
LINC00339-208ENST00000634934 CHFRQ96EP1 664 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 FEM1AQ9BSK4 669 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 C8orf33Q9H7E9 229 aaPredicted RBP14.76□□□□□ -0.05
LINC00339-208ENST00000634934 ATP13A1Q9HD20 1204 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 FBXO10Q9UK96 956 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 DUSP12Q9UNI6 340 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 ATXN2Q99700 1313 aaKnown RBP14.76□□□□□ -0.05
LINC00339-208ENST00000634934 DOCK4Q8N1I0 1966 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 H7C0C1 242 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 CBX4O00257 560 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 MCF2LO15068 1137 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 MYBL2P10244 700 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 CTHP32929 405 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 ATP5OP48047 213 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 EIF3EP60228 445 aaKnown RBP14.76□□□□□ -0.05
LINC00339-208ENST00000634934 C2orf54Q08AI8 447 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 GALNT2Q10471 571 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 SLC12A1Q13621 1099 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 PDK1Q15118 436 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 NOMO1Q15155 1222 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 SIX1Q15475 284 aaPredicted RBP14.76□□□□□ -0.05
LINC00339-208ENST00000634934 PLEKHG6Q3KR16 790 aa14.76□□□□□ -0.05
LINC00339-208ENST00000634934 SLC44A4Q53GD3 710 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms