RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 TUBB2AQ13885 445 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 DMC1Q14565 340 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 SIX1Q15475 284 aaPredicted RBP20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 PLEKHG6Q3KR16 790 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 PREPLQ4J6C6 727 aaPredicted RBP20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 TMEM196Q5HYL7 178 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 NPNTQ6UXI9 565 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 LRRC49Q8IUZ0 686 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 TP53INP2Q8IXH6 220 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 OR7D4Q8NG98 312 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 ACTL9Q8TC94 416 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 WFIKKN2Q8TEU8 576 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 EXOC4Q96A65 974 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 CLDN23Q96B33 292 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 HMCESQ96FZ2 354 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 PNKPQ96T60 521 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 TUBB2BQ9BVA1 445 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 ACE2Q9BYF1 805 aaPredicted RBP20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 MUC3BQ9H195 1237 aa20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 SAE1Q9UBE0 346 aaPredicted RBP20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 INTS6Q9UL03 887 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-221ENST00000622702 KIAA1549LQ6ZVL6 1849 aa20.29■□□□□ 0.84
PDLIM2-221ENST00000622702 URI1O94763 535 aaPredicted RBP20.29■□□□□ 0.84
PDLIM2-221ENST00000622702 CHRNB1P11230 501 aa20.29■□□□□ 0.84
PDLIM2-221ENST00000622702 ACVRL1P37023 503 aa20.29■□□□□ 0.84
PDLIM2-221ENST00000622702 GRSF1Q12849 480 aaKnown RBP eCLIP20.29■□□□□ 0.84
PDLIM2-221ENST00000622702 NOMO1Q15155 1222 aa20.29■□□□□ 0.84
PDLIM2-221ENST00000622702 FSTL4Q6MZW2 842 aa20.29■□□□□ 0.84
PDLIM2-221ENST00000622702 AHI1Q8N157 1196 aa20.29■□□□□ 0.84
PDLIM2-221ENST00000622702 DCAF4L2Q8NA75 395 aa20.29■□□□□ 0.84
PDLIM2-221ENST00000622702 CAPZA3Q96KX2 299 aa20.29■□□□□ 0.84
PDLIM2-221ENST00000622702 FRMD8P1Q9BZ68 369 aaPredicted RBP20.29■□□□□ 0.84
PDLIM2-221ENST00000622702 RBM12Q9NTZ6 932 aaKnown RBP20.29■□□□□ 0.84
PDLIM2-221ENST00000622702 CDC23Q9UJX2 597 aa20.29■□□□□ 0.84
PDLIM2-221ENST00000622702 VPS28Q9UK41 221 aa20.29■□□□□ 0.84
PDLIM2-221ENST00000622702 GARSP41250 739 aaKnown RBP20.28■□□□□ 0.84
PDLIM2-221ENST00000622702 PAPOLAP51003 745 aaKnown RBP20.28■□□□□ 0.84
PDLIM2-221ENST00000622702 OTUD4Q01804 1114 aaKnown RBP20.28■□□□□ 0.84
PDLIM2-221ENST00000622702 MESP2Q0VG99 397 aa20.28■□□□□ 0.84
PDLIM2-221ENST00000622702 SERINC3Q13530 473 aa20.28■□□□□ 0.84
PDLIM2-221ENST00000622702 LRRC32Q14392 662 aa20.28■□□□□ 0.84
PDLIM2-221ENST00000622702 PDK1Q15118 436 aa20.28■□□□□ 0.84
PDLIM2-221ENST00000622702 GEN1Q17RS7 908 aa20.28■□□□□ 0.84
PDLIM2-221ENST00000622702 PITRM1Q5JRX3 1037 aa20.28■□□□□ 0.84
PDLIM2-221ENST00000622702 ADAT2Q7Z6V5 191 aaKnown RBP20.28■□□□□ 0.84
PDLIM2-221ENST00000622702 APCDD1Q8J025 514 aa20.28■□□□□ 0.84
PDLIM2-221ENST00000622702 TERB1Q8NA31 727 aa20.28■□□□□ 0.84
PDLIM2-221ENST00000622702 DTWD2Q8NBA8 298 aa20.28■□□□□ 0.84
PDLIM2-221ENST00000622702 NETO2Q8NC67 525 aa20.28■□□□□ 0.84
PDLIM2-221ENST00000622702 HAUS1Q96CS2 278 aa20.28■□□□□ 0.84
PDLIM2-221ENST00000622702 BRD8Q9H0E9 1235 aa20.28■□□□□ 0.84
PDLIM2-221ENST00000622702 SMARCAL1Q9NZC9 954 aa20.28■□□□□ 0.84
PDLIM2-221ENST00000622702 R3HDM2Q9Y2K5 976 aaKnown RBP20.28■□□□□ 0.84
PDLIM2-221ENST00000622702 A0A0A0MRY4 1105 aa20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 DFFAO00273 331 aa20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 MAP3K6O95382 1288 aa20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 DRD1P21728 446 aa20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 GRIA2P42262 883 aa20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 PAFAH1B1P43034 410 aa20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 RPS9P46781 194 aaKnown RBP20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 ZNF33AQ06730 810 aa20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 XRCC4Q13426 336 aa20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 CCINQ13939 588 aa20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 FUT11Q495W5 492 aa20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 DGKKQ5KSL6 1271 aa20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 IL31Q6EBC2 164 aa20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 ADIPOR2Q86V24 386 aa20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 TTC17Q96AE7 1141 aa20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 ACDQ96AP0 544 aa20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 HDAC11Q96DB2 347 aa20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 TSGA13Q96PP4 275 aa20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 SPON2Q9BUD6 331 aa20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 C2orf49Q9BVC5 232 aaPredicted RBP20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 ATP13A1Q9HD20 1204 aa20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 IPO11Q9UI26 975 aaKnown RBP20.27■□□□□ 0.84
PDLIM2-221ENST00000622702 CXorf51AA0A1B0GTR3 108 aa20.26■□□□□ 0.83
PDLIM2-221ENST00000622702 PDE2AO00408 941 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-221ENST00000622702 PPP1R12AO14974 1030 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-221ENST00000622702 MCF2LO15068 1137 aa20.26■□□□□ 0.83
PDLIM2-221ENST00000622702 KDELR3O43731 214 aa20.26■□□□□ 0.83
PDLIM2-221ENST00000622702 ZMPSTE24O75844 475 aa20.26■□□□□ 0.83
PDLIM2-221ENST00000622702 KAT7O95251 611 aa20.26■□□□□ 0.83
PDLIM2-221ENST00000622702 EGFP01133 1207 aa20.26■□□□□ 0.83
PDLIM2-221ENST00000622702 MAGEA9P43362 315 aa20.26■□□□□ 0.83
PDLIM2-221ENST00000622702 KDSRQ06136 332 aa20.26■□□□□ 0.83
PDLIM2-221ENST00000622702 EIF4HQ15056 248 aaKnown RBP20.26■□□□□ 0.83
PDLIM2-221ENST00000622702 ATPAF2Q8N5M1 289 aa20.26■□□□□ 0.83
PDLIM2-221ENST00000622702 SLC35B2Q8TB61 432 aa20.26■□□□□ 0.83
PDLIM2-221ENST00000622702 HOMER3Q9NSC5 361 aa20.26■□□□□ 0.83
PDLIM2-221ENST00000622702 HPCAL4Q9UM19 191 aa20.26■□□□□ 0.83
PDLIM2-221ENST00000622702 MRFAP1Q9Y605 127 aa20.26■□□□□ 0.83
PDLIM2-221ENST00000622702 HACD1B0YJ81 288 aa20.25■□□□□ 0.83
PDLIM2-221ENST00000622702 MAFKO60675 156 aa20.25■□□□□ 0.83
PDLIM2-221ENST00000622702 PRAMEF11O60813 436 aa20.25■□□□□ 0.83
PDLIM2-221ENST00000622702 APODP05090 189 aa20.25■□□□□ 0.83
PDLIM2-221ENST00000622702 EIF3EP60228 445 aaKnown RBP20.25■□□□□ 0.83
PDLIM2-221ENST00000622702 SULT2A1Q06520 285 aa20.25■□□□□ 0.83
PDLIM2-221ENST00000622702 PPIDQ08752 370 aaKnown RBP20.25■□□□□ 0.83
PDLIM2-221ENST00000622702 CCNG2Q16589 344 aa20.25■□□□□ 0.83
PDLIM2-221ENST00000622702 WHAMMP3Q1A5X7 153 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms