RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 TBL1XO60907 577 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 FGFR3P22607 806 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 MORF4L2Q15014 288 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 FAM133BQ5BKY9 247 aaKnown RBP10.75□□□□□ -0.69
VPS11-208ENST00000621676 HECTD3Q5T447 861 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 RPS27LQ71UM5 84 aaKnown RBP10.75□□□□□ -0.69
VPS11-208ENST00000621676 GPATCH11Q8N954 259 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 WFDC5Q8TCV5 224 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 UROC1Q96N76 676 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 SPATA13Q96N96 652 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 PKMYT1Q99640 499 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 SEMA3CQ99985 751 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 FBXO44Q9H4M3 255 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 VIPAS39Q9H9C1 493 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 CSNK1G1Q9HCP0 422 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 CFAP97Q9P2B7 532 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 VPS28Q9UK41 221 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 CNTRLQ7Z7A1 2325 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 SPTBN2O15020 2390 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 A0A087WUV0 522 aaPredicted RBP10.75□□□□□ -0.69
VPS11-208ENST00000621676 RAMP2O60895 175 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 CYP11A1P05108 521 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 TYMPP19971 482 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 MLLT6P55198 1093 aaPredicted RBP10.75□□□□□ -0.69
VPS11-208ENST00000621676 SLC1A5Q15758 541 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 HHATQ5VTY9 493 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 NADSYN1Q6IA69 706 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 ESRP1Q6NXG1 681 aaKnown RBP10.75□□□□□ -0.69
VPS11-208ENST00000621676 ANKRD33Q7Z3H0 272 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 ARMC2Q8NEN0 867 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 TBC1D31Q96DN5 1066 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 SERPINB11Q96P15 392 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 MRPL9Q9BYD2 267 aaKnown RBP10.75□□□□□ -0.69
VPS11-208ENST00000621676 NKIRAS1Q9NYS0 192 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 ZFATQ9P243 1243 aa10.75□□□□□ -0.69
VPS11-208ENST00000621676 DRG1Q9Y295 367 aaKnown RBP10.75□□□□□ -0.69
VPS11-208ENST00000621676 F5H5T6 163 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 DCLK1O15075 740 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 F9P00740 461 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 ITGB6P18564 788 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 TSPAN8P19075 237 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 TGM2P21980 687 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 CCR2P41597 374 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 STK19P49842 368 aaPredicted RBP10.74□□□□□ -0.69
VPS11-208ENST00000621676 PLK1P53350 603 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 ACAP1Q15027 740 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 C6orf118Q5T5N4 469 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 NAIF1Q69YI7 327 aaPredicted RBP10.74□□□□□ -0.69
VPS11-208ENST00000621676 MFSD5Q6N075 450 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 CDHR3Q6ZTQ4 885 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 PCGF5Q86SE9 256 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 C10orf67Q8IYJ2 551 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 SERAC1Q96JX3 654 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 FCRL3Q96P31 734 aaPredicted RBP10.74□□□□□ -0.69
VPS11-208ENST00000621676 SMC6Q96SB8 1091 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 CCT8L2Q96SF2 557 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 C11orf84Q9BUA3 381 aaPredicted RBP10.74□□□□□ -0.69
VPS11-208ENST00000621676 ATP13A1Q9HD20 1204 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 ZNF840PA6NDX5 716 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 PRR23AA6NEV1 266 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 DPYSL4O14531 572 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 TRIM66O15016 1216 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 C1RP00736 705 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 VIPR2P41587 438 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 WASP42768 502 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 RGRP47804 291 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 RNF219Q5W0B1 726 aaPredicted RBP10.74□□□□□ -0.69
VPS11-208ENST00000621676 PM20D1Q6GTS8 502 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 LVRNQ6Q4G3 990 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 GAREM2Q75VX8 874 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 SEC14L1Q92503 715 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 STAMBPL1Q96FJ0 436 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 RUNDC3BQ96NL0 473 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 OMDQ99983 421 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 FERMT1Q9BQL6 677 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 FAM53CQ9NYF3 392 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 UXTQ9UBK9 157 aaPredicted RBP10.74□□□□□ -0.69
VPS11-208ENST00000621676 SLC39A10Q9ULF5 831 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 USP3Q9Y6I4 520 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 SYN3O14994 580 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 MUSKO15146 869 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 LIG3P49916 1009 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 FPGSQ05932 587 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 CDH18Q13634 790 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 ZNF235Q14590 738 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 MARC1Q5VT66 337 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 LIMS2Q7Z4I7 341 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 BBS7Q8IWZ6 715 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 NDUFAF2Q8N183 169 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 KREMEN2Q8NCW0 462 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 PPP1R14CQ8TAE6 165 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 SPPL2BQ8TCT7 592 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 TCP10LQ8TDR4 215 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 GDPD5Q8WTR4 605 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 RABGEF1Q9UJ41 708 aa10.74□□□□□ -0.69
VPS11-208ENST00000621676 DMDP11532 3685 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 HMGB1P1B2RPK0 211 aaPredicted RBP10.73□□□□□ -0.69
VPS11-208ENST00000621676 PDHA1P08559 390 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 DRG2P55039 364 aaKnown RBP10.73□□□□□ -0.69
VPS11-208ENST00000621676 RPL10AP62906 217 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 226.6 ms