RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 ARCQ7LC44 396 aa12.24□□□□□ -0.45
UPF3B-204ENST00000619445 TMPRSS12Q86WS5 348 aa12.24□□□□□ -0.45
UPF3B-204ENST00000619445 SH2D3CQ8N5H7 860 aa12.24□□□□□ -0.45
UPF3B-204ENST00000619445 PDCD7Q8N8D1 485 aaKnown RBP12.24□□□□□ -0.45
UPF3B-204ENST00000619445 NT5C3BQ969T7 300 aa12.24□□□□□ -0.45
UPF3B-204ENST00000619445 C18orf8Q96DM3 657 aa12.24□□□□□ -0.45
UPF3B-204ENST00000619445 NPY6RQ99463 290 aa12.24□□□□□ -0.45
UPF3B-204ENST00000619445 TUBGCP2Q9BSJ2 902 aa12.24□□□□□ -0.45
UPF3B-204ENST00000619445 RETREG1Q9H6L5 497 aa12.24□□□□□ -0.45
UPF3B-204ENST00000619445 ARHGEF38Q9NXL2 777 aa12.24□□□□□ -0.45
UPF3B-204ENST00000619445 CHMP5Q9NZZ3 219 aa12.24□□□□□ -0.45
UPF3B-204ENST00000619445 PPM1HQ9ULR3 514 aa12.24□□□□□ -0.45
UPF3B-204ENST00000619445 BTBD3Q9Y2F9 522 aa12.24□□□□□ -0.45
UPF3B-204ENST00000619445 DAAM1Q9Y4D1 1078 aa12.24□□□□□ -0.45
UPF3B-204ENST00000619445 SLCO1B1Q9Y6L6 691 aa12.24□□□□□ -0.45
UPF3B-204ENST00000619445 CXorf51AA0A1B0GTR3 108 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 A0A1W2PR77 199 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 PRAMEF26H0Y7S4 382 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 GRAP2O75791 330 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 PRNPP04156 253 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 ERBB2P04626 1255 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 RHOCP08134 193 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 EEF1GP26641 437 aaKnown RBP12.23□□□□□ -0.45
UPF3B-204ENST00000619445 DRD3P35462 400 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 RECQLP46063 649 aaPredicted RBP12.23□□□□□ -0.45
UPF3B-204ENST00000619445 NXPH1P58417 271 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 DEUP1Q05D60 604 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 SLC20A2Q08357 652 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 ILKQ13418 452 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 STAT4Q14765 748 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 SLC47A2Q86VL8 602 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 ZSCAN30Q86W11 494 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 ERICH1Q86X53 443 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 CIR1Q86X95 450 aaPredicted RBP12.23□□□□□ -0.45
UPF3B-204ENST00000619445 ZNF677Q86XU0 584 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 DCAF4L2Q8NA75 395 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 FAM174AQ8TBP5 190 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 PIP4K2CQ8TBX8 421 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 ALG14Q96F25 216 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 PPP1R16AQ96I34 528 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 TKTL2Q9H0I9 626 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 SIK2Q9H0K1 926 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 CLSTN2Q9H4D0 955 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 SIX2Q9NPC8 291 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 DYRK4Q9NR20 520 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 LHX6Q9UPM6 363 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 OR51B4Q9Y5P0 310 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 DOCK4Q8N1I0 1966 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 ZFHX4Q86UP3 3567 aa12.23□□□□□ -0.45
UPF3B-204ENST00000619445 FREM2Q5SZK8 3169 aa12.22□□□□□ -0.45
UPF3B-204ENST00000619445 ITPR1Q14643 2758 aa12.22□□□□□ -0.45
UPF3B-204ENST00000619445 PES1O00541 588 aaKnown RBP12.22□□□□□ -0.45
UPF3B-204ENST00000619445 ENC1O14682 589 aa12.22□□□□□ -0.45
UPF3B-204ENST00000619445 LDOC1O95751 146 aaPredicted RBP12.22□□□□□ -0.45
UPF3B-204ENST00000619445 TPM2P07951 284 aa12.22□□□□□ -0.45
UPF3B-204ENST00000619445 CYP11B1P15538 503 aa12.22□□□□□ -0.45
UPF3B-204ENST00000619445 EPHA8P29322 1005 aaPredicted RBP12.22□□□□□ -0.45
UPF3B-204ENST00000619445 ETFBP38117 255 aa12.22□□□□□ -0.45
UPF3B-204ENST00000619445 SULT1E1P49888 294 aa12.22□□□□□ -0.45
UPF3B-204ENST00000619445 CENPCQ03188 943 aa12.22□□□□□ -0.45
UPF3B-204ENST00000619445 RAPGEF1Q13905 1077 aa12.22□□□□□ -0.45
UPF3B-204ENST00000619445 DRAP1Q14919 205 aaPredicted RBP12.22□□□□□ -0.45
UPF3B-204ENST00000619445 HS1BP3Q53T59 392 aa12.22□□□□□ -0.45
UPF3B-204ENST00000619445 FAM102AQ5T9C2 384 aaPredicted RBP12.22□□□□□ -0.45
UPF3B-204ENST00000619445 RETSATQ6NUM9 610 aa12.22□□□□□ -0.45
UPF3B-204ENST00000619445 LAYNQ6UX15 382 aa12.22□□□□□ -0.45
UPF3B-204ENST00000619445 ATP11CQ8NB49 1132 aa12.22□□□□□ -0.45
UPF3B-204ENST00000619445 TMIEQ8NEW7 156 aa12.22□□□□□ -0.45
UPF3B-204ENST00000619445 SAP25Q8TEE9 199 aa12.22□□□□□ -0.45
UPF3B-204ENST00000619445 HAPLN3Q96S86 360 aa12.22□□□□□ -0.45
UPF3B-204ENST00000619445 PIGVQ9NUD9 493 aa12.22□□□□□ -0.45
UPF3B-204ENST00000619445 ARID1BQ8NFD5 2236 aaPredicted RBP12.22□□□□□ -0.45
UPF3B-204ENST00000619445 IGLV3-10A0A075B6K4 115 aa12.21□□□□□ -0.45
UPF3B-204ENST00000619445 ILVBLA1L0T0 632 aa12.21□□□□□ -0.45
UPF3B-204ENST00000619445 GOLGA8CPA6NN73 597 aa12.21□□□□□ -0.45
UPF3B-204ENST00000619445 DRGXA6NNA5 263 aa12.21□□□□□ -0.45
UPF3B-204ENST00000619445 KCNK3O14649 394 aa12.21□□□□□ -0.45
UPF3B-204ENST00000619445 WNT1P04628 370 aa12.21□□□□□ -0.45
UPF3B-204ENST00000619445 RNASE9P60153 205 aaKnown RBP12.21□□□□□ -0.45
UPF3B-204ENST00000619445 C1QBPQ07021 282 aaKnown RBP12.21□□□□□ -0.45
UPF3B-204ENST00000619445 KCNT1Q5JUK3 1230 aa12.21□□□□□ -0.45
UPF3B-204ENST00000619445 KLHDC7AQ5VTJ3 777 aa12.21□□□□□ -0.45
UPF3B-204ENST00000619445 AGBL4Q5VU57 503 aa12.21□□□□□ -0.45
UPF3B-204ENST00000619445 Q6ZVU0 165 aa12.21□□□□□ -0.45
UPF3B-204ENST00000619445 CNDP2Q96KP4 475 aaKnown RBP12.21□□□□□ -0.45
UPF3B-204ENST00000619445 STK33Q9BYT3 514 aa12.21□□□□□ -0.45
UPF3B-204ENST00000619445 CEP44Q9C0F1 390 aa12.21□□□□□ -0.45
UPF3B-204ENST00000619445 NUP62CLQ9H1M0 184 aa12.21□□□□□ -0.45
UPF3B-204ENST00000619445 EBF2Q9HAK2 575 aa12.21□□□□□ -0.45
UPF3B-204ENST00000619445 SCUBE2Q9NQ36 999 aa12.21□□□□□ -0.45
UPF3B-204ENST00000619445 PLCB1Q9NQ66 1216 aa12.21□□□□□ -0.45
UPF3B-204ENST00000619445 FASNP49327 2511 aaKnown RBP12.21□□□□□ -0.46
UPF3B-204ENST00000619445 SPEGQ15772 3267 aa12.21□□□□□ -0.46
UPF3B-204ENST00000619445 RTN2O75298 545 aa12.2□□□□□ -0.46
UPF3B-204ENST00000619445 RFPL3O75679 317 aa12.2□□□□□ -0.46
UPF3B-204ENST00000619445 ADCY5O95622 1261 aa12.2□□□□□ -0.46
UPF3B-204ENST00000619445 SRCP12931 536 aa12.2□□□□□ -0.46
UPF3B-204ENST00000619445 UCHL3P15374 230 aa12.2□□□□□ -0.46
UPF3B-204ENST00000619445 VAV1P15498 845 aa12.2□□□□□ -0.46
UPF3B-204ENST00000619445 OR1E1P30953 314 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms