RNA–Protein interactions for RNA: ENST00000617712.1

AC242842.1-201, humanhuman

TSL 3 BASIC

Gene AC242842.1, Length 447 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC242842.1-201ENST00000617712 RBM44Q6ZP01 1051 aaKnown RBP11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 USP53Q70EK8 1073 aa11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 HORMAD1Q86X24 394 aa11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 CCAR2Q8N163 923 aaKnown RBP11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 IFI44Q8TCB0 444 aa11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 DQX1Q8TE96 717 aaKnown RBP11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 TTC9Q92623 222 aa11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 SLC39A13Q96H72 371 aa11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 PPP1R16AQ96I34 528 aa11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 FEM1CQ96JP0 617 aa11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 PRICKLE1Q96MT3 831 aaPredicted RBP11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 NT5C1BQ96P26 610 aa11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 CCNL2Q96S94 520 aaPredicted RBP11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 IL12RB2Q99665 862 aa11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 IL17BQ9UHF5 180 aa11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 SALL4Q9UJQ4 1053 aa11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 VPS28Q9UK41 221 aa11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 SATB2Q9UPW6 733 aa11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 COQ4Q9Y3A0 265 aa11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 PCDHGA8Q9Y5G5 932 aa11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 HS3ST3A1Q9Y663 406 aa11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 CSNK1G3Q9Y6M4 447 aa11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 SETXQ7Z333 2677 aaKnown RBP11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 NUMA1Q14980 2115 aa11.14□□□□□ -0.63
AC242842.1-201ENST00000617712 A0A1B0GVL5 298 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 KCNU1A8MYU2 1149 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 C10orf142B7Z368 130 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 TMX2-CTNND1H3BSU7 103 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 K7ESM1 405 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 KPNA3O00505 521 aaPredicted RBP11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 MED7O43513 233 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 ATP9BO43861 1147 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 TCEA3O75764 348 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 PRNPP04156 253 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 NTRK1P04629 796 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 ZSCAN22P10073 491 aaPredicted RBP11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 SNX16P57768 344 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 MCCD1P59942 119 aaPredicted RBP11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 CDK17Q00537 523 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 FKBP3Q00688 224 aaKnown RBP11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 LRMPQ12912 555 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 SGCGQ13326 291 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 ZC3H12AQ5D1E8 599 aaKnown RBP11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 ATG14Q6ZNE5 492 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 Q6ZSR6 202 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 ZSCAN30Q86W11 494 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 ZSCAN1Q8NBB4 408 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 WDR36Q8NI36 951 aaKnown RBP11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 FRS2Q8WU20 508 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 BTN2A2Q8WVV5 523 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 NAT6Q93015 286 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 FAM131CQ96AQ9 280 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 EEF2KMTQ96G04 330 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 RPRD1AQ96P16 312 aaPredicted RBP11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 MYOCQ99972 504 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 GTPBP4Q9BZE4 634 aaKnown RBP11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 POPDC2Q9HBU9 364 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 METTL14Q9HCE5 456 aaKnown RBP11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 RMND1Q9NWS8 449 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 UCKL1Q9NWZ5 548 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 SEPT10Q9P0V9 454 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 ARMCX3Q9UH62 379 aaPredicted RBP11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 NAALADL1Q9UQQ1 740 aa11.13□□□□□ -0.63
AC242842.1-201ENST00000617712 TNFSF15O95150 251 aa11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 TRUB2O95900 331 aaKnown RBP11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 F13A1P00488 732 aa11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 PFKFB1P16118 471 aa11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 PRLRP16471 622 aa11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 CCR1P32246 355 aa11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 YWHAZP63104 245 aaKnown RBP11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 RPS21P63220 83 aaKnown RBP11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 NFATC3Q12968 1075 aa11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 NR0B2Q15466 257 aa11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 CDKN3Q16667 212 aa11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 AGBL4Q5VU57 503 aa11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 ATP11CQ8NB49 1132 aa11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 TMEM145Q8NBT3 493 aa11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 TMIEQ8NEW7 156 aa11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 SCG3Q8WXD2 468 aaKnown RBP11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 KLK6Q92876 244 aa11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 FEM1AQ9BSK4 669 aa11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 C2orf49Q9BVC5 232 aaPredicted RBP11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 MUC3BQ9H195 1237 aa11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 THAP9Q9H5L6 903 aa11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 ASCL3Q9NQ33 180 aa11.12□□□□□ -0.63
AC242842.1-201ENST00000617712 WDFY3Q8IZQ1 3526 aa11.11□□□□□ -0.63
AC242842.1-201ENST00000617712 PTPRQQ9UMZ3 2332 aa11.11□□□□□ -0.63
AC242842.1-201ENST00000617712 M0QYT0 321 aa11.11□□□□□ -0.63
AC242842.1-201ENST00000617712 FPGTO14772 594 aa11.11□□□□□ -0.63
AC242842.1-201ENST00000617712 TPP1O14773 563 aa11.11□□□□□ -0.63
AC242842.1-201ENST00000617712 SLC16A3O15427 465 aaKnown RBP11.11□□□□□ -0.63
AC242842.1-201ENST00000617712 CLDN11O75508 207 aa11.11□□□□□ -0.63
AC242842.1-201ENST00000617712 VAV1P15498 845 aa11.11□□□□□ -0.63
AC242842.1-201ENST00000617712 CHRNA3P32297 505 aa11.11□□□□□ -0.63
AC242842.1-201ENST00000617712 RABIFP47224 123 aa11.11□□□□□ -0.63
AC242842.1-201ENST00000617712 MAPK8IP2Q13387 824 aaPredicted RBP11.11□□□□□ -0.63
AC242842.1-201ENST00000617712 PTK2BQ14289 1009 aa11.11□□□□□ -0.63
AC242842.1-201ENST00000617712 ZNF284Q2VY69 593 aa11.11□□□□□ -0.63
AC242842.1-201ENST00000617712 ARL13BQ3SXY8 428 aa11.11□□□□□ -0.63
AC242842.1-201ENST00000617712 CBWD6Q4V339 395 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms