RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 UGT1A10Q9HAW8 530 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 UGT1A8Q9HAW9 530 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 CRTAC1Q9NQ79 661 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 TRHDEQ9UKU6 1024 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 TRIP12Q14669 1992 aaPredicted RBP11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 MAGEB16A2A368 324 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 M0QZQ0 153 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 NEMP1O14524 444 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 CXCR3P49682 368 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 ADIGQ0VDE8 80 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 DSC3Q14574 896 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 GLRA4Q5JXX5 417 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 SPANXN3Q5MJ09 141 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 GDPD5Q8WTR4 605 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 FATE1Q969F0 183 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 ITFG2Q969R8 447 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 PGBD4Q96DM1 585 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 PRPF18Q99633 342 aaKnown RBP11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 ACBD6Q9BR61 282 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 FAM105AQ9NUU6 356 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 IL1RAPL1Q9NZN1 696 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 FNIP2Q9P278 1114 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 PDP2Q9P2J9 529 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 DSEQ9UL01 958 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 PCDHGB4Q9UN71 923 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 SORCS3Q9UPU3 1222 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 LZTS1Q9Y250 596 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 PCDHGB5Q9Y5G0 923 aa11.09□□□□□ -0.63
SENP3-EIF4A1-201ENST00000614237 CXorf49A8MYA2 514 aaPredicted RBP11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 APRTP07741 180 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 PDGFRBP09619 1106 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 HOXC13P31276 330 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ABCG1P45844 678 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 NRG1Q02297 640 aaPredicted RBP11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 UPP1Q16831 310 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CST9Q5W186 159 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ATG16L1Q676U5 607 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CDHR3Q6ZTQ4 885 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 NUDCD3Q8IVD9 361 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 LRRC43Q8N309 656 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 PTCD3Q96EY7 689 aaKnown RBP11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 LPIN3Q9BQK8 851 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 DMAP1Q9NPF5 467 aaPredicted RBP11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ARHGEF38Q9NXL2 777 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 SLC17A6Q9P2U8 582 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 FIS1Q9Y3D6 152 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 GOLGA8QA0A0J9YX86 632 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 GOLGA8OA6NCC3 632 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 GOLGA8NF8WBI6 632 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 HCRTO43612 131 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 OCRLQ01968 901 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 GALNT2Q10471 571 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 BST1Q10588 318 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 GPR162Q16538 588 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CMPK2Q5EBM0 449 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ACBD5Q5T8D3 534 aaPredicted RBP11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 HPS6Q86YV9 775 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 OR6Y1Q8NGX8 325 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 P2RY11Q96G91 374 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 SENP8Q96LD8 212 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 SMOQ99835 787 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 STX18Q9P2W9 335 aaKnown RBP11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 FAF1Q9UNN5 650 aaPredicted RBP11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 NR2E3Q9Y5X4 410 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CCDC78A2IDD5 438 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 PSMD3O43242 534 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 MFSD11O43934 449 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 BEST1O76090 585 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 MYL3P08590 195 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CYBAP13498 195 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 KCNA4P22459 653 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CCR3P51677 355 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ATXN1P54253 815 aaKnown RBP11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 TBCCQ15814 346 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 PRAMEF19Q5SWL8 479 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ENDOVQ8N8Q3 282 aaKnown RBP11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 KLHL23Q8NBE8 558 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 COLGALT1Q8NBJ5 622 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ZMIZ2Q8NF64 920 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ZSCAN18Q8TBC5 510 aaPredicted RBP11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ADAM32Q8TC27 787 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 USP13Q92995 863 aaPredicted RBP11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 HSPBAP1Q96EW2 488 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 DCUN1D5Q9BTE7 237 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CASS4Q9NQ75 786 aa11.08□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 AIM2O14862 343 aa11.07□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 GPR182O15218 404 aa11.07□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 GSRP00390 522 aa11.07□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 THP07101 528 aa11.07□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 TFPTP0C1Z6 253 aa11.07□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CSH1P0DML2 217 aa11.07□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CSH2P0DML3 217 aa11.07□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 RAG1P15918 1043 aa11.07□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 CST5P28325 142 aaPredicted RBP11.07□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 RPL10AP62906 217 aaKnown RBP11.07□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 ARTNQ5T4W7 220 aa11.07□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 WSCD1Q658N2 575 aa11.07□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 TRIM67Q6ZTA4 783 aa11.07□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 TMEM135Q86UB9 458 aa11.07□□□□□ -0.64
SENP3-EIF4A1-201ENST00000614237 FAM35AQ86V20 835 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms