RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 RFX8Q6ZV50 586 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 PIGZQ86VD9 579 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 C11orf74Q86VG3 221 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 FAM9CQ8IZT9 166 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 TMEM199Q8N511 208 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 SLC25A41Q8N5S1 370 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 HDAC7Q8WUI4 952 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 CAPSLQ8WWF8 208 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 EXT2Q93063 718 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 HIST1H2AHQ96KK5 128 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 ZNF558Q96NG5 402 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 HIST1H2AJQ99878 128 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 TSEN34Q9BSV6 310 aaKnown RBP8.88□□□□□ -0.99
PDE6A-204ENST00000613228 H2AFJQ9BTM1 129 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 BCO2Q9BYV7 579 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 DCTN4Q9UJW0 460 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 AKAP11Q9UKA4 1901 aa8.88□□□□□ -0.99
PDE6A-204ENST00000613228 FAM153BP0C7A2 387 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 ACAT1P24752 427 aaKnown RBP8.87□□□□□ -0.99
PDE6A-204ENST00000613228 MMP13P45452 471 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 PPP3CCP48454 512 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 FAM153CQ494X1 144 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 KCNT2Q6UVM3 1135 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 ASB2Q96Q27 587 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 TKTL2Q9H0I9 626 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 PREBQ9HCU5 417 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 NDFIP2Q9NV92 336 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 SELENONQ9NZV5 590 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 VTI1BQ9UEU0 232 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 DNMT3LQ9UJW3 386 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 A0A1B0GW55 424 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 ZNF197O14709 1029 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 STX7O15400 261 aaKnown RBP8.87□□□□□ -0.99
PDE6A-204ENST00000613228 VPS26AO75436 327 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 DUX4L2P0CJ85 424 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 DUX4L3P0CJ86 424 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 DUX4L4P0CJ87 422 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 DUX4L5P0CJ88 424 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 DUX4L6P0CJ89 424 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 DUX4L7P0CJ90 424 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 CSH1P0DML2 217 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 CSH2P0DML3 217 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 AMPD1P23109 780 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 ELK3P41970 407 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 RPL5P46777 297 aaKnown RBP8.87□□□□□ -0.99
PDE6A-204ENST00000613228 FLT3LGP49771 235 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 NOMO1Q15155 1222 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 USP41Q3LFD5 358 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 PPP1R26Q5T8A7 1209 aaPredicted RBP8.87□□□□□ -0.99
PDE6A-204ENST00000613228 SLC24A5Q71RS6 500 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 BTN2A1Q7KYR7 527 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 PHC3Q8NDX5 983 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 EGFL8Q99944 293 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 MLXIPLQ9NP71 852 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 GIN1Q9NXP7 522 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 PKD2L2Q9NZM6 624 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 DUX4Q9UBX2 424 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 HAO1Q9UJM8 370 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 FAM25AB3EWG3 89 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 FAM25CB3EWG5 89 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 FAM25GB3EWG6 89 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 GPR25O00155 361 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 ALOX15BO15296 676 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 MYCP01106 439 aaPredicted RBP8.87□□□□□ -0.99
PDE6A-204ENST00000613228 USP17L7P0C7H9 530 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 KITP10721 976 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 PTK2BQ14289 1009 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 RETSATQ6NUM9 610 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 SLC51AQ86UW1 340 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 TCAIMQ8N3R3 496 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 NAT14Q8WUY8 206 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 GPR63Q9BZJ6 419 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 NPHS2Q9NP85 383 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 FIS1Q9Y3D6 152 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 SQORQ9Y6N5 450 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 CCDC162PA2VCL2 907 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 XYLBO75191 536 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 RHOBTB1O94844 696 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 FAM58BPP0C7Q3 252 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 GALK1P51570 392 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 TRMT5Q32P41 509 aaKnown RBP8.87□□□□□ -0.99
PDE6A-204ENST00000613228 PTPN20Q4JDL3 420 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 SYTL3Q4VX76 610 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 PCID2Q5JVF3 399 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 SYCP2LQ5T4T6 812 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 LDLRAD1Q5T700 205 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 SPPL2BQ8TCT7 592 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 UCMAQ8WVF2 138 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 BORCS5Q969J3 196 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 SLC9A7Q96T83 725 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 MRPL1Q9BYD6 325 aaKnown RBP8.87□□□□□ -0.99
PDE6A-204ENST00000613228 ILKAPQ9H0C8 392 aaPredicted RBP8.87□□□□□ -0.99
PDE6A-204ENST00000613228 EMC3Q9P0I2 261 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 COG5Q9UP83 839 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 RWDD3Q9Y3V2 267 aa8.87□□□□□ -0.99
PDE6A-204ENST00000613228 DLGAP3O95886 979 aa8.86□□□□□ -0.99
PDE6A-204ENST00000613228 KCNE1P15382 129 aa8.86□□□□□ -0.99
PDE6A-204ENST00000613228 CD52P31358 61 aa8.86□□□□□ -0.99
PDE6A-204ENST00000613228 SKIV2L2P42285 1042 aaKnown RBP8.86□□□□□ -0.99
PDE6A-204ENST00000613228 CHN2P52757 468 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms