RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 INPP4BO15327 924 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 MED7O43513 233 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 SLC25A3Q00325 362 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 XAGE3Q8WTP9 111 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 CENPNQ96H22 339 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 Q96MT0 163 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 PIGSQ96S52 555 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 CENPOQ9BU64 300 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 ANO3Q9BYT9 981 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 C12orf10Q9HB07 376 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 PAQR5Q9NXK6 330 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 HSPBP1Q9NZL4 362 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 NAGPAQ9UK23 515 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 NRKQ7Z2Y5 1582 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 hCG_1642624A0A1W2PR95 340 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 ATP6V1G2-DDX39BF2Z307 99 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 F8W031 263 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 ALX3O95076 343 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 GLP2RO95838 553 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 C7P10643 843 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 TNNI1P19237 187 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 RRM1P23921 792 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 NOMO3P69849 1222 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 NOMO1Q15155 1222 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 ZNF804AQ7Z570 1209 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 PRICKLE1Q96MT3 831 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 APOL2Q9BQE5 337 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 GBA3Q9H227 469 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 ERGIC3Q9Y282 383 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 USP31Q70CQ4 1352 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 MAGEB2O15479 319 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 CD19P15391 556 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 DGKQP52824 942 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 ATP2C1P98194 919 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 IL5RAQ01344 420 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 TNK2Q07912 1038 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 OTUD3Q5T2D3 398 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 ASRGL1Q7L266 308 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 FAM49BQ9NUQ9 324 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 PCDH10Q9P2E7 1040 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 MAB21L2Q9Y586 359 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 KRBA1A5PL33 1030 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 DSC3Q14574 896 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 SCPEP1Q9HB40 452 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 AKAP7Q9P0M2 348 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 XPR1Q9UBH6 696 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 SEC14L4Q9UDX3 406 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 CDH22Q9UJ99 828 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 YTHDC2Q9H6S0 1430 aaKnown RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 MYO1GB0I1T2 1018 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 H3BM21 787 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 NDUFS2O75306 463 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 PLA2G4BP0C869 781 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 GNA12Q03113 381 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 LRRC74AQ0VAA2 488 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 BST2Q10589 180 aaKnown RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 OCLNQ16625 522 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 HECTD3Q5T447 861 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 GLYCTKQ8IVS8 523 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 CENPLQ8N0S6 344 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 EID3Q8N140 333 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 AP2M1Q96CW1 435 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 DGCR6LQ9BY27 220 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 SNX8Q9Y5X2 465 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 ECM29Q5VYK3 1845 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 EMSYQ7Z589 1322 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 PHRF1Q9P1Y6 1649 aaKnown RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 FAM86C2PA6NEL3 165 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 J3QRK9 145 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 AKAP8O43823 692 aaKnown RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 SERPINA1P01009 418 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 MATN1P21941 496 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 PEX6Q13608 980 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 SIGIRRQ6IA17 410 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 UGT3A1Q6NUS8 523 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 DGKHQ86XP1 1220 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 TAB3Q8N5C8 712 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 PTCD2Q8WV60 388 aaKnown RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 FBXL8Q96CD0 374 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 DHRS9Q9BPW9 319 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 CHCHD6Q9BRQ6 235 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 TDRD1Q9BXT4 1180 aaKnown RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 TRIM9Q9C026 710 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 SPAG4Q9NPE6 437 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 COPRSQ9NQ92 184 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 MTRRQ9UBK8 725 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 OIP5O43482 229 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 KDM4BO94953 1096 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 KCNK10P57789 538 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 ZNF45Q02386 682 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 LPCAT4Q643R3 524 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 SPATA6LQ8N4H0 392 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 EYA1Q99502 592 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 MAGEB5Q9BZ81 275 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 USP42Q9H9J4 1324 aaKnown RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 KCNN4O15554 427 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 RGS10O43665 173 aa5.02□□□□□ -1.61
VPS13D-213ENST00000613099 TFRCP02786 760 aaKnown RBP5.02□□□□□ -1.61
VPS13D-213ENST00000613099 PTPN2P17706 415 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms