RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 GALNT3Q14435 633 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 FSCBQ5H9T9 825 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 C10orf76Q5T2E6 689 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 LCE3CQ5T5A8 94 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 CCDC181Q5TID7 509 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 FAM217AQ8IXS0 508 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 OR4N4Q8N0Y3 316 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 TNIP3Q96KP6 325 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 SGCZQ96LD1 299 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 FIZ1Q96SL8 496 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 SFXN1Q9H9B4 322 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 SLC39A10Q9ULF5 831 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 DTNAQ9Y4J8 743 aa3.73□□□□□ -1.81
SMCHD1-206ENST00000581631 VWA5AO00534 786 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 HNRNPDLO14979 420 aaKnown RBP3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 PIP5K1BO14986 540 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 PLA2G6O60733 806 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 AMTP48728 403 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 FOXL2P58012 376 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 KRTAP10-3P60369 221 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 CSHL1Q14406 222 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 GRM4Q14833 912 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 ZNF284Q2VY69 593 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 TMEM71Q6P5X7 295 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 SMIM29Q86T20 159 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 TTC30AQ86WT1 665 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 TMED6Q8WW62 240 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 MUL1Q969V5 352 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 MCRS1Q96EZ8 462 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 ADAD1Q96M93 576 aaKnown RBP3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 C1QTNF5Q9BXJ0 243 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 STK33Q9BYT3 514 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 NECTIN3Q9NQS3 549 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 HELLSQ9NRZ9 838 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 TM7SF3Q9NS93 570 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 IGSF9Q9P2J2 1179 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 CA14Q9ULX7 337 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 TNFSF13BQ9Y275 285 aa3.72□□□□□ -1.81
SMCHD1-206ENST00000581631 SNED1Q8TER0 1413 aa3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 M0QYT0 321 aa3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 LDB2O43679 373 aa3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 BUB3O43684 328 aa3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 LIASO43766 372 aa3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 PEPDP12955 493 aa3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 ADPRHP54922 357 aa3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 TUBA1BP68363 451 aa3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 TLE3Q04726 772 aa3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 PLCB4Q15147 1175 aa3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 AAK1Q2M2I8 961 aa3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 MAP9Q49MG5 647 aa3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 ARL6IP4Q66PJ3 421 aaKnown RBP3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 CCSAPQ6IQ19 270 aaPredicted RBP3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 XRRA1Q6P2D8 792 aa3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 CAMK1DQ8IU85 385 aa3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 FAM186BQ8IYM0 893 aa3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 DEPTORQ8TB45 409 aa3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 FAR2Q96K12 515 aa3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 OSBPL5Q9H0X9 879 aaPredicted RBP3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 CHST12Q9NRB3 414 aa3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 CDC23Q9UJX2 597 aa3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 FBXO4Q9UKT5 387 aa3.71□□□□□ -1.82
SMCHD1-206ENST00000581631 IGLV5-52A0A0A0MRZ9 124 aa3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 CER1O95813 267 aa3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 GLP2RO95838 553 aa3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 ANXA6P08133 673 aa3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 KLRK1P26718 216 aa3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 AKT1P31749 480 aa3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 ALDH18A1P54886 795 aaKnown RBP3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 TAS2R50P59544 299 aa3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 RHAGQ02094 409 aa3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 ZBTB16Q05516 673 aa3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 ANKRD40Q6AI12 368 aa3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 AAGABQ6PD74 315 aa3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 SYTL1Q8IYJ3 562 aa3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 IGSF21Q96ID5 467 aa3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 PRPF18Q99633 342 aaKnown RBP3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 ELAC2Q9BQ52 826 aaKnown RBP3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 GAREM1Q9H706 876 aa3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 NLRC4Q9NPP4 1024 aa3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 TCF7L2Q9NQB0 619 aa3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 DONSONQ9NYP3 566 aa3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 SLC4A4Q9Y6R1 1079 aa3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 TP53BP1Q12888 1972 aaPredicted RBP3.7□□□□□ -1.82
SMCHD1-206ENST00000581631 CYP3A7-CYP3A51PA0A087WV96 503 aa3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 C3orf70A6NLC5 250 aaPredicted RBP3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 AQP12BA6NM10 295 aa3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 MCIDASD6RGH6 385 aa3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 ASNA1O43681 348 aa3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 RPP40O75818 363 aaKnown RBP3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 NTSR2O95665 410 aa3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 ALDOAP04075 364 aaKnown RBP3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 IFIT2P09913 472 aaKnown RBP3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 NPPBP16860 134 aa3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 CYP3A7P24462 503 aa3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 PPM1AP35813 382 aa3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 STARD3Q14849 445 aa3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 CEP85LQ5SZL2 805 aa3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 RINT1Q6NUQ1 792 aa3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 ADAM5Q6NVV9 412 aa3.69□□□□□ -1.82
SMCHD1-206ENST00000581631 ERAP2Q6P179 960 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms