RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 SPATA20Q8TB22 786 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 NDRG1Q92597 394 aaKnown RBP7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 KLK6Q92876 244 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 CYFIP2Q96F07 1278 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 IFT43Q96FT9 208 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 ZNF71Q9NQZ8 489 aaPredicted RBP7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 TMPRSS4Q9NRS4 437 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 GPR27Q9NS67 375 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 EVA1BQ9NVM1 165 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 FOXJ2Q9P0K8 574 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 SALL4Q9UJQ4 1053 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 TUBD1Q9UJT1 453 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 STRIP2Q9ULQ0 834 aa7.94□□□□□ -1.14
SMARCE1-217ENST00000580654 PRAMEF33A0A0G2JMD5 474 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 A1L4Q6 167 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 J3QL48 77 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 MUSKO15146 869 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 NVLO15381 856 aaKnown RBP7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 SLC7A4O43246 635 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 TGFB1I1O43294 461 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 PRAMEF10O60809 474 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 AGFG2O95081 481 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 ASLP04424 464 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 SRPRAP08240 638 aaKnown RBP7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 ITIH1P19827 911 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 DCTP40126 519 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 ETV5P41161 510 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 STK19P49842 368 aaPredicted RBP7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 NEK4P51957 841 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 ZNF445P59923 1031 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 YWHAGP61981 247 aaKnown RBP eCLIP7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 HMGN5P82970 282 aaKnown RBP7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 EIF3IQ13347 325 aaKnown RBP7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 ALCAMQ13740 583 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 SPIDRQ14159 915 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 FZD2Q14332 565 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 NR0B2Q15466 257 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 DEFB133Q30KQ1 61 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 ZNF699Q32M78 642 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 FAM133BQ5BKY9 247 aaKnown RBP7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 PITRM1Q5JRX3 1037 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 TPRG1LQ5T0D9 272 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 MPP7Q5T2T1 576 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 OR6B2Q6IFH4 312 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 ABI3BPQ7Z7G0 1075 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 UNC93AQ86WB7 457 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 MFN1Q8IWA4 741 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 SLC35F3Q8IY50 421 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 FIBINQ8TAL6 211 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 EPSTI1Q96J88 318 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 RPL10LQ96L21 214 aaKnown RBP7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 BMFQ96LC9 184 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 PRICKLE1Q96MT3 831 aaPredicted RBP7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 CCDC3Q9BQI4 270 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 BOCQ9BWV1 1114 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 FOXP3Q9BZS1 431 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 KIAA1586Q9HCI6 787 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 EPB41L5Q9HCM4 733 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 DNAJC28Q9NX36 388 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 PISDQ9UG56 409 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 SFMBT1Q9UHJ3 866 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 CSNK1G3Q9Y6M4 447 aa7.93□□□□□ -1.14
SMARCE1-217ENST00000580654 A0A1W2PQU0 124 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 C9orf172C9J069 976 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 H3BM21 787 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 MSI1O43347 362 aaKnown RBP7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 SEMA7AO75326 666 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 LATS1O95835 1130 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 C4BPAP04003 597 aaKnown RBP7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 CSF2P04141 144 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 SLFN14P0C7P3 912 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 IDEP14735 1019 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 NME1P15531 152 aaKnown RBP7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 LONP1P36776 959 aaKnown RBP7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 ASPAP45381 313 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 HNRNPKP61978 463 aaKnown RBP eCLIP7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 ELAVL3Q14576 367 aaKnown RBP7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 ZNF284Q2VY69 593 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 RAB41Q5JT25 222 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 NADSYN1Q6IA69 706 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 SPOPLQ6IQ16 392 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 Q6ZSR6 202 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 DSG4Q86SJ6 1040 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 APCDD1Q8J025 514 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 FAM184AQ8NB25 1140 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 RASSF8Q8NHQ8 419 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 SSC4DQ8WTU2 575 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 FRS2Q8WU20 508 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 HPS1Q92902 700 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 THAP11Q96EK4 314 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 PPP1R13BQ96KQ4 1090 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 DUSP16Q9BY84 665 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 PREBQ9HCU5 417 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 SEPT10Q9P0V9 454 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 STIM2Q9P246 746 aa7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 ZFR2Q9UPR6 939 aaKnown RBP7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 HBS1LQ9Y450 684 aaKnown RBP7.92□□□□□ -1.14
SMARCE1-217ENST00000580654 PCNX1Q96RV3 2341 aa7.91□□□□□ -1.14
SMARCE1-217ENST00000580654 A0A1W2PQM1 296 aa7.91□□□□□ -1.14
SMARCE1-217ENST00000580654 VPS37CA5D8V6 355 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms