RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 PCDHGA10Q9Y5H3 936 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 GPC6Q9Y625 555 aaPredicted RBP5.2□□□□□ -1.58
NF1-219ENST00000579081 IQCMA0A1B0GVH7 501 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 SDR42E2A6NKP2 422 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 STX16-NPEPL1H3BU86 382 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 STX16O14662 325 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 KPNA5O15131 536 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 KMOO15229 486 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 FBXO21O94952 628 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 TYMPP19971 482 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 PDX1P52945 283 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 MTAPQ13126 283 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 C5orf22Q49AR2 442 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 SLC13A5Q86YT5 568 aaPredicted RBP5.2□□□□□ -1.58
NF1-219ENST00000579081 PEX5LQ8IYB4 626 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 ZNF248Q8NDW4 579 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 C12orf66Q96MD2 445 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 TUBA1CQ9BQE3 449 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 SH2D3AQ9BRG2 576 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 TMEM121Q9BTD3 319 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 SLC6A15Q9H2J7 730 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 CCDC59Q9P031 241 aaKnown RBP5.2□□□□□ -1.58
NF1-219ENST00000579081 ACOT9Q9Y305 439 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 LYVE1Q9Y5Y7 322 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 LMTK2Q8IWU2 1503 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 ANKDD1BA6NHY2 528 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 ERI2A8K979 691 aaKnown RBP5.2□□□□□ -1.58
NF1-219ENST00000579081 TBX3O15119 743 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 SEC22BO75396 215 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 PGM3O95394 542 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 BCL10O95999 233 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 ALDH2P05091 517 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 CTPS1P17812 591 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 FASP25445 335 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 HPCAL1P37235 193 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 COILP38432 576 aaPredicted RBP5.2□□□□□ -1.58
NF1-219ENST00000579081 STXBP1P61764 594 aaKnown RBP5.2□□□□□ -1.58
NF1-219ENST00000579081 OVGP1Q12889 678 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 MTM1Q13496 603 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 DGUOKQ16854 277 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 PTAR1Q7Z6K3 402 aaPredicted RBP5.2□□□□□ -1.58
NF1-219ENST00000579081 BRSK2Q8IWQ3 736 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 PIGBQ92521 554 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 TMEM120AQ9BXJ8 343 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.2□□□□□ -1.58
NF1-219ENST00000579081 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.2□□□□□ -1.58
NF1-219ENST00000579081 HEY2Q9UBP5 337 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 KLF15Q9UIH9 416 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 SCN4AP35499 1836 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 A0A087WZ62 844 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 UBDO15205 165 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 PHGDHO43175 533 aaKnown RBP5.2□□□□□ -1.58
NF1-219ENST00000579081 TSPAN3O60637 253 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 XYLBO75191 536 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 IGSF6O95976 241 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 PTGS2P35354 604 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 STARP49675 285 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 CHN2P52757 468 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 TXNL4AP83876 142 aaKnown RBP5.2□□□□□ -1.58
NF1-219ENST00000579081 BOP1Q14137 746 aaKnown RBP5.2□□□□□ -1.58
NF1-219ENST00000579081 Q4G0T1 1027 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 RIPOR1Q6ZS17 1223 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 SLFN11Q7Z7L1 901 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 FAXDC2Q96IV6 333 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 DHX33Q9H6R0 707 aaKnown RBP5.2□□□□□ -1.58
NF1-219ENST00000579081 CYLDQ9NQC7 956 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 TLR8Q9NR97 1041 aaKnown RBP5.2□□□□□ -1.58
NF1-219ENST00000579081 NR2E3Q9Y5X4 410 aa5.2□□□□□ -1.58
NF1-219ENST00000579081 TCEA3O75764 348 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 FCER2P06734 321 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 PRG2P13727 222 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 CASP4P49662 377 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 ARF3P61204 181 aaPredicted RBP5.19□□□□□ -1.58
NF1-219ENST00000579081 ARF1P84077 181 aaKnown RBP5.19□□□□□ -1.58
NF1-219ENST00000579081 SRSF11Q05519 484 aaKnown RBP5.19□□□□□ -1.58
NF1-219ENST00000579081 SCARF1Q14162 830 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 PDK2Q15119 407 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 NAB2Q15742 525 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 AGKQ53H12 422 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 ZCCHC12Q6PEW1 402 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 CEP68Q76N32 757 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 PCSK9Q8NBP7 692 aaKnown RBP5.19□□□□□ -1.58
NF1-219ENST00000579081 OR2W6PQ8NHA6 318 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 KBTBD7Q8WVZ9 684 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 TNFRSF25Q93038 417 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 SEPHS2Q99611 448 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 REEP2Q9BRK0 252 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 KCNN2Q9H2S1 579 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 ATXN3LQ9H3M9 355 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 INTS7Q9NVH2 962 aaKnown RBP5.19□□□□□ -1.58
NF1-219ENST00000579081 KIAA1257Q9ULG3 409 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 OR10H1Q9Y4A9 318 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 CCNB2O95067 398 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 ERBB2P04626 1255 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 RPL4P36578 427 aaKnown RBP5.19□□□□□ -1.58
NF1-219ENST00000579081 GSSP48637 474 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 DPYSQ14117 519 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 AMHR2Q16671 573 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 PAGE2BQ5JRK9 111 aa5.19□□□□□ -1.58
NF1-219ENST00000579081 GLRA4Q5JXX5 417 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms