RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 ECT2LQ008S8 904 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 NRG1Q02297 640 aaPredicted RBP7.26□□□□□ -1.25
CASC3-205ENST00000577605 MESP2Q0VG99 397 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 NME3Q13232 169 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 CAMK2GQ13555 558 aaPredicted RBP7.26□□□□□ -1.25
CASC3-205ENST00000577605 AUHQ13825 339 aaKnown RBP7.26□□□□□ -1.25
CASC3-205ENST00000577605 TAF5Q15542 800 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 ZSCAN23Q3MJ62 389 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 FNDC3BQ53EP0 1204 aaKnown RBP7.26□□□□□ -1.25
CASC3-205ENST00000577605 SYCP2LQ5T4T6 812 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 SFMBT2Q5VUG0 894 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 RNF219Q5W0B1 726 aaPredicted RBP7.26□□□□□ -1.25
CASC3-205ENST00000577605 RAP1GAP2Q684P5 730 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 PMS2CLQ68D20 193 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 NADSYN1Q6IA69 706 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 ACAD10Q6JQN1 1059 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 FBXL22Q6P050 247 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 RFWD3Q6PCD5 774 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 LRSAM1Q6UWE0 723 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 BNIPLQ7Z465 357 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 IRF2BP2Q7Z5L9 587 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 ADIPOR2Q86V24 386 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 CARNMT1Q8N4J0 409 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 C3orf20Q8ND61 904 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 CADM4Q8NFZ8 388 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 OR2T3Q8NH03 318 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 HMGB4Q8WW32 186 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 GTPBP3Q969Y2 492 aaKnown RBP7.26□□□□□ -1.25
CASC3-205ENST00000577605 LMLNQ96KR4 655 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 RPRD1AQ96P16 312 aaPredicted RBP7.26□□□□□ -1.25
CASC3-205ENST00000577605 EIF3CQ99613 913 aaKnown RBP7.26□□□□□ -1.25
CASC3-205ENST00000577605 SELENOOQ9BVL4 669 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 TKTL2Q9H0I9 626 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 TMEM245Q9H330 911 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 CBX8Q9HC52 389 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 CD248Q9HCU0 757 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 SEMA4GQ9NTN9 838 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 SCHIP1Q9P0W5 487 aaPredicted RBP7.26□□□□□ -1.25
CASC3-205ENST00000577605 PPARGC1AQ9UBK2 798 aaKnown RBP7.26□□□□□ -1.25
CASC3-205ENST00000577605 TBC1D30Q9Y2I9 924 aa7.26□□□□□ -1.25
CASC3-205ENST00000577605 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.26□□□□□ -1.254e-10■■■□□ 15.9
CASC3-205ENST00000577605 COL4A3Q01955 1670 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 DOCK6Q96HP0 2047 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 DENND4CQ5VZ89 1909 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 ZNF318Q5VUA4 2279 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 BCLAF3A2AJT9 711 aaKnown RBP7.25□□□□□ -1.25
CASC3-205ENST00000577605 DRGXA6NNA5 263 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 GOLGA8SH3BPF8 625 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 TEX33O43247 280 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 NDUFS2O75306 463 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 PAGE1O75459 146 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 GRAP2O75791 330 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 EPHX1P07099 455 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 MYBL1P10243 752 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 PDGFRAP16234 1089 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 CHRNB2P17787 502 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 HTR7P34969 479 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 IL12RB1P42701 662 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 ZNF135P52742 658 aaPredicted RBP7.25□□□□□ -1.25
CASC3-205ENST00000577605 LIMK1P53667 647 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 PSMA6P60900 246 aaKnown RBP7.25□□□□□ -1.25
CASC3-205ENST00000577605 RPS24P62847 133 aaKnown RBP7.25□□□□□ -1.25
CASC3-205ENST00000577605 ZBED6P86452 979 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 SLC20A2Q08357 652 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 KLHL30Q0D2K2 578 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 CCDC15Q0P6D6 951 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 TRIM14Q14142 442 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 PUM1Q14671 1186 aaKnown RBP eCLIP7.25□□□□□ -1.25
CASC3-205ENST00000577605 ACAP1Q15027 740 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 ASIC2Q16515 512 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 FUT11Q495W5 492 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.25□□□□□ -1.25
CASC3-205ENST00000577605 PITRM1Q5JRX3 1037 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 MEI1Q5TIA1 1274 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 MMS22LQ6ZRQ5 1243 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 USP30Q70CQ3 517 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 DSG4Q86SJ6 1040 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 KBTBD6Q86V97 674 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 TMPRSS6Q8IU80 811 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 DRC7Q8IY82 874 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 CCAR2Q8N163 923 aaKnown RBP7.25□□□□□ -1.25
CASC3-205ENST00000577605 C12orf50Q8NA57 414 aaPredicted RBP7.25□□□□□ -1.25
CASC3-205ENST00000577605 NETO1Q8TDF5 533 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 RHBDD1Q8TEB9 315 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 SLC20A1Q8WUM9 679 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 CENPIQ92674 756 aaPredicted RBP7.25□□□□□ -1.25
CASC3-205ENST00000577605 SIPA1Q96FS4 1042 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 MRGPRX1Q96LB2 322 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 PRICKLE1Q96MT3 831 aaPredicted RBP7.25□□□□□ -1.25
CASC3-205ENST00000577605 ACOX2Q99424 681 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 RTKNQ9BST9 563 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 TPSD1Q9BZJ3 242 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 MRPL47Q9HD33 250 aaKnown RBP7.25□□□□□ -1.25
CASC3-205ENST00000577605 PIGVQ9NUD9 493 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 SEPT11Q9NVA2 429 aaKnown RBP7.25□□□□□ -1.25
CASC3-205ENST00000577605 PARVAQ9NVD7 372 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 CACNA2D2Q9NY47 1150 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 CALCOCO1Q9P1Z2 691 aa7.25□□□□□ -1.25
CASC3-205ENST00000577605 USP36Q9P275 1121 aaKnown RBP7.25□□□□□ -1.25
CASC3-205ENST00000577605 SUSD2Q9UGT4 822 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms