RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 RPL13P26373 211 aaKnown RBP6.51□□□□□ -1.37
NUP88-212ENST00000576708 CORO1AP31146 461 aaKnown RBP6.51□□□□□ -1.37
NUP88-212ENST00000576708 ETFBP38117 255 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 PRCPP42785 496 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 GIPRP48546 466 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 MXI1P50539 228 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 PMS1P54277 932 aaKnown RBP6.51□□□□□ -1.37
NUP88-212ENST00000576708 GOLGA8FQ08AF8 430 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 GOLGA8DPQ0D2H9 430 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 LRMPQ12912 555 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 PPP2R5EQ16537 467 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 GEN1Q17RS7 908 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 GOLGA7BQ2TAP0 167 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 SFRP5Q5T4F7 317 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 DAB2IPQ5VWQ8 1189 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 LYSMD4Q5XG99 296 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 KRT39Q6A163 491 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 ANKRD40Q6AI12 368 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 ISM2Q6H9L7 571 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 KIAA1324Q6UXG2 1013 aaKnown RBP6.51□□□□□ -1.37
NUP88-212ENST00000576708 BHLHA9Q7RTU4 235 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 CCDC186Q7Z3E2 898 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 TRMT11Q7Z4G4 463 aaKnown RBP6.51□□□□□ -1.37
NUP88-212ENST00000576708 PIGZQ86VD9 579 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 SYT12Q8IV01 421 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 DENND1CQ8IV53 801 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 SLC41A1Q8IVJ1 513 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 PLD6Q8N2A8 252 aaKnown RBP6.51□□□□□ -1.37
NUP88-212ENST00000576708 TRIML1Q8N9V2 468 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 RBBP8NLQ8NC74 664 aaPredicted RBP6.51□□□□□ -1.37
NUP88-212ENST00000576708 UBA3Q8TBC4 463 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 SORCS1Q8WY21 1168 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 TMEM176AQ96HP8 235 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 XPO6Q96QU8 1125 aaKnown RBP6.51□□□□□ -1.37
NUP88-212ENST00000576708 GTPBP2Q9BX10 602 aaKnown RBP6.51□□□□□ -1.37
NUP88-212ENST00000576708 ULBP1Q9BZM6 244 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 IMPG2Q9BZV3 1241 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 RAB20Q9NX57 234 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 EVLQ9UI08 416 aaPredicted RBP6.51□□□□□ -1.37
NUP88-212ENST00000576708 AGO1Q9UL18 857 aaKnown RBP6.51□□□□□ -1.37
NUP88-212ENST00000576708 PCDHA5Q9Y5H7 936 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 STON1Q9Y6Q2 735 aa6.51□□□□□ -1.37
NUP88-212ENST00000576708 NUP205Q92621 2012 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 TRIM49BA6NDI0 452 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 CETN3O15182 167 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 TSPAN3O60637 253 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 PENKP01210 267 aaPredicted RBP6.5□□□□□ -1.37
NUP88-212ENST00000576708 RALAP11233 206 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 GTF2H1P32780 548 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 ETV3P41162 512 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 IL12RB1P42701 662 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 TKTL1P51854 596 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 MFAP3P55082 362 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 OXCT1P55809 520 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 YWHAGP61981 247 aaKnown RBP eCLIP6.5□□□□□ -1.37
NUP88-212ENST00000576708 FAM193AP78312 1265 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 SHC2P98077 582 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 ZNF33AQ06730 810 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 BYSLQ13895 437 aaKnown RBP6.5□□□□□ -1.37
NUP88-212ENST00000576708 EDRF1Q3B7T1 1238 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 FUT11Q495W5 492 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 DCAF17Q5H9S7 520 aaPredicted RBP6.5□□□□□ -1.37
NUP88-212ENST00000576708 TCERG1LQ5VWI1 586 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 FYB2Q5VWT5 728 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 ARHGAP17Q68EM7 881 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 SDE2Q6IQ49 451 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 KLHDC10Q6PID8 442 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 SLC23A3Q6PIS1 610 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 RSRC2Q7L4I2 434 aaKnown RBP6.5□□□□□ -1.37
NUP88-212ENST00000576708 CACUL1Q86Y37 369 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 CCDC150Q8NCX0 1101 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 FBXL13Q8NEE6 735 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 PIWIL1Q96J94 861 aaKnown RBP6.5□□□□□ -1.37
NUP88-212ENST00000576708 MRGPRX1Q96LB2 322 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 HSPA12BQ96MM6 686 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 KREMEN1Q96MU8 473 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 CAMK1GQ96NX5 476 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 GABRG3Q99928 467 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 NUSAP1Q9BXS6 441 aaKnown RBP6.5□□□□□ -1.37
NUP88-212ENST00000576708 SCAND2PQ9GZW5 306 aaPredicted RBP6.5□□□□□ -1.37
NUP88-212ENST00000576708 PNPLA8Q9NP80 782 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 CLIC5Q9NZA1 410 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 MARCH2Q9P0N8 246 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 SFMBT1Q9UHJ3 866 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 FBXO10Q9UK96 956 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 STRIP2Q9ULQ0 834 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 RNF112Q9ULX5 631 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 WASF3Q9UPY6 502 aa6.5□□□□□ -1.37
NUP88-212ENST00000576708 KMT2BQ9UMN6 2715 aaPredicted RBP6.5□□□□□ -1.37
NUP88-212ENST00000576708 MYH10P35580 1976 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 ADAMTS9Q9P2N4 1935 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 YJEFN3A6XGL0 299 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 KCNJ18B7U540 433 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 E7ENQ6 273 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 TNFRSF10CO14798 259 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 SMAD7O15105 426 aaKnown RBP6.49□□□□□ -1.37
NUP88-212ENST00000576708 AP5Z1O43299 807 aa6.49□□□□□ -1.37
NUP88-212ENST00000576708 MSI1O43347 362 aaKnown RBP6.49□□□□□ -1.37
NUP88-212ENST00000576708 HYAL3O43820 417 aaPredicted RBP6.49□□□□□ -1.37
NUP88-212ENST00000576708 ZBED1O96006 694 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms