RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 DGKBQ9Y6T7 804 aa6.48□□□□□ -1.37
LINC00556-201ENST00000569603 CEP192Q8TEP8 1941 aa6.48□□□□□ -1.37
LINC00556-201ENST00000569603 GCN1Q92616 2671 aaKnown RBP6.48□□□□□ -1.37
LINC00556-201ENST00000569603 UBE4BO95155 1302 aa6.48□□□□□ -1.37
LINC00556-201ENST00000569603 ASXL3Q9C0F0 2248 aa6.48□□□□□ -1.37
LINC00556-201ENST00000569603 PCDH15Q96QU1 1955 aa6.48□□□□□ -1.37
LINC00556-201ENST00000569603 TRAV19A0A0A6YYK7 116 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.47□□□□□ -1.37
LINC00556-201ENST00000569603 E2F8A0AVK6 867 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 F8VP50 259 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 FOXN3O00409 490 aaPredicted RBP6.47□□□□□ -1.37
LINC00556-201ENST00000569603 SPTLC2O15270 562 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 FOXD2O60548 495 aaPredicted RBP6.47□□□□□ -1.37
LINC00556-201ENST00000569603 GREM1O60565 184 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 RPP40O75818 363 aaKnown RBP6.47□□□□□ -1.37
LINC00556-201ENST00000569603 YEATS4O95619 227 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 AGR2O95994 175 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 CYP17A1P05093 508 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 USP17L7P0C7H9 530 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 TYRP1P17643 537 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 CASP1P29466 404 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 PGFP49763 221 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 BPIFB3P59826 476 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 SNRPFP62306 86 aaKnown RBP6.47□□□□□ -1.37
LINC00556-201ENST00000569603 PLIN5Q00G26 463 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 IFRD2Q12894 506 aaPredicted RBP6.47□□□□□ -1.37
LINC00556-201ENST00000569603 SQSTM1Q13501 440 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 PIN1Q13526 163 aaPredicted RBP6.47□□□□□ -1.37
LINC00556-201ENST00000569603 SF3A2Q15428 464 aaKnown RBP6.47□□□□□ -1.37
LINC00556-201ENST00000569603 TCEA2Q15560 299 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 SEPT7Q16181 437 aaKnown RBP6.47□□□□□ -1.37
LINC00556-201ENST00000569603 FBXO43Q4G163 708 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 CT47A1Q5JQC4 288 aaPredicted RBP6.47□□□□□ -1.37
LINC00556-201ENST00000569603 FAM26FQ5R3K3 315 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 C1orf220Q5T0J3 134 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 SNX30Q5VWJ9 437 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 DENND5BQ6ZUT9 1274 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 CACNA2D4Q7Z3S7 1137 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 SPATA2LQ8IUW3 424 aaPredicted RBP6.47□□□□□ -1.37
LINC00556-201ENST00000569603 CCDC65Q8IXS2 484 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 ADGRG2Q8IZP9 1017 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 SYCP3Q8IZU3 236 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 CPA6Q8N4T0 437 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 FBXO15Q8NCQ5 510 aaPredicted RBP6.47□□□□□ -1.37
LINC00556-201ENST00000569603 OLIG1Q8TAK6 271 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 HNRNPLLQ8WVV9 542 aaKnown RBP6.47□□□□□ -1.37
LINC00556-201ENST00000569603 ATP2A3Q93084 1043 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 SNX21Q969T3 373 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 SEC16BQ96JE7 1060 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 ALPK1Q96QP1 1244 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 CGRRF1Q99675 332 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 B3GNT5Q9BYG0 378 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 ZNF518BQ9C0D4 1074 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 WNT10AQ9GZT5 417 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 DUSP15Q9H1R2 295 aaPredicted RBP6.47□□□□□ -1.37
LINC00556-201ENST00000569603 DPEP3Q9H4B8 488 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 RMI1Q9H9A7 625 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 UPF2Q9HAU5 1272 aaKnown RBP6.47□□□□□ -1.37
LINC00556-201ENST00000569603 KIAA1586Q9HCI6 787 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 DUS2Q9NX74 493 aaKnown RBP6.47□□□□□ -1.37
LINC00556-201ENST00000569603 GGT7Q9UJ14 662 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 PNMA8BQ9ULN7 279 aaPredicted RBP6.47□□□□□ -1.37
LINC00556-201ENST00000569603 MAGED2Q9UNF1 606 aaPredicted RBP6.47□□□□□ -1.37
LINC00556-201ENST00000569603 CYP8B1Q9UNU6 501 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 WASF3Q9UPY6 502 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 PLAAQ9Y263 795 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 TTLL3Q9Y4R7 772 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 PCDHGA5Q9Y5G8 931 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 MAGED1Q9Y5V3 778 aaPredicted RBP6.47□□□□□ -1.37
LINC00556-201ENST00000569603 MGAQ8IWI9 3026 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 NUMA1Q14980 2115 aa6.47□□□□□ -1.37
LINC00556-201ENST00000569603 FLNBO75369 2602 aaKnown RBP6.46□□□□□ -1.37
LINC00556-201ENST00000569603 GOLGA4Q13439 2230 aaKnown RBP6.46□□□□□ -1.37
LINC00556-201ENST00000569603 BCLAF3A2AJT9 711 aaKnown RBP6.46□□□□□ -1.38
LINC00556-201ENST00000569603 LEFTY2O00292 366 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 DCLK1O15075 740 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 CUTAO60888 179 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 TMCC2O75069 709 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 ATG13O75143 517 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 KIAA0754O94854 1291 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 VNN1O95497 513 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 APBB3O95704 486 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 CBX7O95931 251 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 CKMP06732 381 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 KRT19P08727 400 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 TMEM191BP0C7N4 346 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 MSL3P1P0C860 447 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 HDCP19113 662 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 SERPINB3P29508 390 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 CTNNA1P35221 906 aaKnown RBP6.46□□□□□ -1.38
LINC00556-201ENST00000569603 ETFBP38117 255 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 KIR2DL1P43626 348 aaPredicted RBP6.46□□□□□ -1.38
LINC00556-201ENST00000569603 STT3AP46977 705 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 RENBPP51606 427 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 MYL6P60660 151 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 KRT83P78385 493 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 SHC2P98077 582 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 NFKB2Q00653 900 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 COX10Q12887 443 aa6.46□□□□□ -1.38
LINC00556-201ENST00000569603 TAF10Q12962 218 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms