RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 DCP2Q8IU60 420 aaKnown RBP12.83□□□□□ -0.36
SNX29-207ENST00000568949 IFI44Q8TCB0 444 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 CLEC4CQ8WTT0 213 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 PRR11Q96HE9 360 aaPredicted RBP12.83□□□□□ -0.36
SNX29-207ENST00000568949 BTN2A3PQ96KV6 586 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 NCKIPSDQ9NZQ3 722 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 IL17BQ9UHF5 180 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 CFAP45Q9UL16 551 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 MAPK8IP1Q9UQF2 711 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 NAALADL1Q9UQQ1 740 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 AHCTF1Q8WYP5 2266 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 KIF26BQ2KJY2 2108 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 RP1P56715 2156 aa12.83□□□□□ -0.36
SNX29-207ENST00000568949 COL27A1Q8IZC6 1860 aaPredicted RBP12.82□□□□□ -0.36
SNX29-207ENST00000568949 A0A1W2PNU3 283 aaPredicted RBP12.82□□□□□ -0.36
SNX29-207ENST00000568949 A0A1W2PQU0 124 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 CDRT15L2A8MXV6 281 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 F5H5T6 163 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 CETN3O15182 167 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 SART1O43290 800 aaKnown RBP12.82□□□□□ -0.36
SNX29-207ENST00000568949 MYF5P13349 255 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 PRLRP16471 622 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 ZNF18P17022 549 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 HNRNPA2B1P22626 353 aaKnown RBP12.82□□□□□ -0.36
SNX29-207ENST00000568949 RPL34P49207 117 aaKnown RBP12.82□□□□□ -0.36
SNX29-207ENST00000568949 HNRNPKP61978 463 aaKnown RBP eCLIP12.82□□□□□ -0.36
SNX29-207ENST00000568949 ACCSLQ4AC99 568 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 PIP5KL1Q5T9C9 394 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 TTC39BQ5VTQ0 682 aaPredicted RBP12.82□□□□□ -0.36
SNX29-207ENST00000568949 ZCCHC8Q6NZY4 707 aaKnown RBP12.82□□□□□ -0.36
SNX29-207ENST00000568949 CCDC81Q6ZN84 652 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 PRICKLE2Q7Z3G6 844 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 CLEC14AQ86T13 490 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 TAC4Q86UU9 113 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 HORMAD1Q86X24 394 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 CCAR2Q8N163 923 aaKnown RBP12.82□□□□□ -0.36
SNX29-207ENST00000568949 OR13H1Q8NG92 308 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 TPCN2Q8NHX9 752 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.82□□□□□ -0.36
SNX29-207ENST00000568949 TRIM62Q9BVG3 475 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 CALN1Q9BXU9 219 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 FAM117AQ9C073 453 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 MIS12Q9H081 205 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 SLC25A13Q9UJS0 675 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 RCOR1Q9UKL0 485 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 ENTPD2Q9Y5L3 495 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 CSNK1G3Q9Y6M4 447 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 TRPM6Q9BX84 2022 aa12.82□□□□□ -0.36
SNX29-207ENST00000568949 TCAF2A6NFQ2 919 aa12.81□□□□□ -0.36
SNX29-207ENST00000568949 M0QYV0 167 aa12.81□□□□□ -0.36
SNX29-207ENST00000568949 PFKFB1P16118 471 aa12.81□□□□□ -0.36
SNX29-207ENST00000568949 TGM2P21980 687 aa12.81□□□□□ -0.36
SNX29-207ENST00000568949 CMA1P23946 247 aa12.81□□□□□ -0.36
SNX29-207ENST00000568949 SRSF1Q07955 248 aaKnown RBP eCLIP12.81□□□□□ -0.36
SNX29-207ENST00000568949 CLN3Q13286 438 aa12.81□□□□□ -0.36
SNX29-207ENST00000568949 DLG2Q15700 870 aa12.81□□□□□ -0.36
SNX29-207ENST00000568949 ARL13BQ3SXY8 428 aa12.81□□□□□ -0.36
SNX29-207ENST00000568949 FOXD4L6Q3SYB3 417 aaPredicted RBP12.81□□□□□ -0.36
SNX29-207ENST00000568949 ZC3H12AQ5D1E8 599 aaKnown RBP12.81□□□□□ -0.36
SNX29-207ENST00000568949 FOXD4L5Q5VV16 416 aaPredicted RBP12.81□□□□□ -0.36
SNX29-207ENST00000568949 CXorf57Q6NSI4 855 aaKnown RBP12.81□□□□□ -0.36
SNX29-207ENST00000568949 TMEM270Q6UE05 265 aa12.81□□□□□ -0.36
SNX29-207ENST00000568949 FOXD4L3Q6VB84 417 aaPredicted RBP12.81□□□□□ -0.36
SNX29-207ENST00000568949 GCNT7Q6ZNI0 430 aa12.81□□□□□ -0.36
SNX29-207ENST00000568949 RBM44Q6ZP01 1051 aaKnown RBP12.81□□□□□ -0.36
SNX29-207ENST00000568949 ARL14Q8N4G2 192 aa12.81□□□□□ -0.36
SNX29-207ENST00000568949 ATP6V0D2Q8N8Y2 350 aa12.81□□□□□ -0.36
SNX29-207ENST00000568949 FOXD4L4Q8WXT5 416 aaPredicted RBP12.81□□□□□ -0.36
SNX29-207ENST00000568949 KLK6Q92876 244 aa12.81□□□□□ -0.36
SNX29-207ENST00000568949 FAM149B1Q96BN6 582 aa12.81□□□□□ -0.36
SNX29-207ENST00000568949 ALG14Q96F25 216 aa12.81□□□□□ -0.36
SNX29-207ENST00000568949 ATXN7L3BQ96GX2 97 aa12.81□□□□□ -0.36
SNX29-207ENST00000568949 PRMT1Q99873 361 aaKnown RBP12.81□□□□□ -0.36
SNX29-207ENST00000568949 MYOCQ99972 504 aa12.81□□□□□ -0.36
SNX29-207ENST00000568949 ZSWIM1Q9BR11 485 aa12.81□□□□□ -0.36
SNX29-207ENST00000568949 SLC12A6Q9UHW9 1150 aa12.81□□□□□ -0.36
SNX29-207ENST00000568949 HPSEQ9Y251 543 aa12.81□□□□□ -0.36
SNX29-207ENST00000568949 HEMK1Q9Y5R4 338 aaPredicted RBP12.81□□□□□ -0.36
SNX29-207ENST00000568949 DOPEY2Q9Y3R5 2298 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.8□□□□□ -0.36
SNX29-207ENST00000568949 A0A1B0GVL5 298 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 EME2A4GXA9 379 aaPredicted RBP12.8□□□□□ -0.36
SNX29-207ENST00000568949 A6NNZ2 444 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 K7ELQ4 463 aaPredicted RBP12.8□□□□□ -0.36
SNX29-207ENST00000568949 TCEA3O75764 348 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 F13A1P00488 732 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 IGLV3-25P01717 112 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 PRR29P0C7W0 189 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 ZSCAN22P10073 491 aaPredicted RBP12.8□□□□□ -0.36
SNX29-207ENST00000568949 DPYDQ12882 1025 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 NFATC3Q12968 1075 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 ZNF177Q13360 481 aaPredicted RBP12.8□□□□□ -0.36
SNX29-207ENST00000568949 DCAF17Q5H9S7 520 aaPredicted RBP12.8□□□□□ -0.36
SNX29-207ENST00000568949 RABGAP1LQ5R372 815 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 TCERG1LQ5VWI1 586 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 SYPL2Q5VXT5 272 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 Q6ZSR6 202 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 Q6ZVU0 165 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 SLC22A18ASQ8N1D0 253 aa12.8□□□□□ -0.36
SNX29-207ENST00000568949 TMIEQ8NEW7 156 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms