RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 CFAP69A5D8W1 941 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 ARHGAP42A6NI28 874 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 H7C0C1 242 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 DFFAO00273 331 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 MAP3K6O95382 1288 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 ADH5P11766 374 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 TYRP14679 529 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 SP100P23497 879 aaPredicted RBP13.21□□□□□ -0.29
SPG7-209ENST00000564047 GDI1P31150 447 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 ATP5OP48047 213 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 PAPOLAP51003 745 aaKnown RBP13.21□□□□□ -0.29
SPG7-209ENST00000564047 GNA12Q03113 381 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 LMNB2Q03252 620 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 PPIDQ08752 370 aaKnown RBP13.21□□□□□ -0.29
SPG7-209ENST00000564047 NR1H3Q13133 447 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 SLC12A1Q13621 1099 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 RUNX3Q13761 415 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 PRKD1Q15139 912 aaPredicted RBP13.21□□□□□ -0.29
SPG7-209ENST00000564047 DARS2Q6PI48 645 aaKnown RBP13.21□□□□□ -0.29
SPG7-209ENST00000564047 TP53INP2Q8IXH6 220 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 CPA6Q8N4T0 437 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 OR52K2Q8NGK3 314 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 ATL2Q8NHH9 583 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 GRK7Q8WTQ7 553 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 TFB1MQ8WVM0 346 aaKnown RBP13.21□□□□□ -0.29
SPG7-209ENST00000564047 SLCO2A1Q92959 643 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 ARHGEF2Q92974 986 aaKnown RBP13.21□□□□□ -0.29
SPG7-209ENST00000564047 BHMTQ93088 406 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 HMCESQ96FZ2 354 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 QKIQ96PU8 341 aaKnown RBP eCLIP13.21□□□□□ -0.29
SPG7-209ENST00000564047 KRT12Q99456 494 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 EBF3Q9H4W6 596 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 ECT2Q9H8V3 914 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 HPS4Q9NQG7 708 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 ZNF446Q9NWS9 450 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 PLK2Q9NYY3 685 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 KIAA1522Q9P206 1035 aaPredicted RBP13.21□□□□□ -0.29
SPG7-209ENST00000564047 IGSF9Q9P2J2 1179 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 PCYOX1Q9UHG3 505 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 ZNF148Q9UQR1 794 aa13.21□□□□□ -0.29
SPG7-209ENST00000564047 DMXL1Q9Y485 3027 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 CACNG3O60359 315 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 MAFKO60675 156 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 CCNCP24863 283 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 MCM3P25205 808 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 STIP1P31948 543 aaKnown RBP13.2□□□□□ -0.3
SPG7-209ENST00000564047 KCNJ1P48048 391 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 PLK1P53350 603 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 SIGLEC14Q08ET2 396 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 SERINC3Q13530 473 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 DHX34Q14147 1143 aaKnown RBP13.2□□□□□ -0.3
SPG7-209ENST00000564047 FSCBQ5H9T9 825 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 RNF219Q5W0B1 726 aaPredicted RBP13.2□□□□□ -0.3
SPG7-209ENST00000564047 TIGD7Q6NT04 549 aaPredicted RBP13.2□□□□□ -0.3
SPG7-209ENST00000564047 MAATS1Q7Z4T9 603 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 CCDC105Q8IYK2 499 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 ATPAF2Q8N5M1 289 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 CCDC33Q8N5R6 958 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 NOA1Q8NC60 698 aaKnown RBP13.2□□□□□ -0.3
SPG7-209ENST00000564047 NETO2Q8NC67 525 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 CCNYQ8ND76 341 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 CCDC26Q8TAB7 109 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 FATE1Q969F0 183 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 LMLNQ96KR4 655 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 XPO6Q96QU8 1125 aaKnown RBP13.2□□□□□ -0.3
SPG7-209ENST00000564047 LGMNQ99538 433 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 ACE2Q9BYF1 805 aaPredicted RBP13.2□□□□□ -0.3
SPG7-209ENST00000564047 PARD6BQ9BYG5 372 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 AMACRQ9UHK6 382 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 IPO11Q9UI26 975 aaKnown RBP13.2□□□□□ -0.3
SPG7-209ENST00000564047 FBXO10Q9UK96 956 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 CLEC4EQ9ULY5 219 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 OR51B4Q9Y5P0 310 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 CACNA1BQ00975 2339 aa13.2□□□□□ -0.3
SPG7-209ENST00000564047 DNAH14Q0VDD8 3507 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 A0A0D9SEW6 157 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 ARNTLO00327 626 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 MTSS1O43312 755 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 KDELR3O43731 214 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 ERLIN1O75477 346 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 ECEL1O95672 775 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 RBL1P28749 1068 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 AVPR2P30518 371 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 ACVRL1P37023 503 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 CSKP41240 450 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 PTGIRP43119 386 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 DR1Q01658 176 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 TNK2Q07912 1038 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 IL10RBQ08334 325 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 AP1B1Q10567 949 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 LMAN2Q12907 356 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 GLE1Q53GS7 698 aaKnown RBP13.19□□□□□ -0.3
SPG7-209ENST00000564047 HEATR6Q6AI08 1181 aaKnown RBP13.19□□□□□ -0.3
SPG7-209ENST00000564047 SYDE1Q6ZW31 735 aaPredicted RBP13.19□□□□□ -0.3
SPG7-209ENST00000564047 ETFBKMTQ8IXQ9 262 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 CCDC13Q8IYE1 715 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 ALLCQ8N6M5 410 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.19□□□□□ -0.3
SPG7-209ENST00000564047 OR7D4Q8NG98 312 aa13.19□□□□□ -0.3
SPG7-209ENST00000564047 WFDC5Q8TCV5 224 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms