RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 FAM26EQ8N5C1 309 aa16.44■□□□□ 0.22
RNF40-205ENST00000563909 MRGPRX3Q96LB0 322 aa16.44■□□□□ 0.22
RNF40-205ENST00000563909 EPN3Q9H201 632 aa16.44■□□□□ 0.22
RNF40-205ENST00000563909 THAP9Q9H5L6 903 aa16.44■□□□□ 0.22
RNF40-205ENST00000563909 LRRC4CQ9HCJ2 640 aa16.44■□□□□ 0.22
RNF40-205ENST00000563909 NBASA2RRP1 2371 aa16.44■□□□□ 0.22
RNF40-205ENST00000563909 CPED1A4D0V7 1026 aa16.43■□□□□ 0.22
RNF40-205ENST00000563909 NEMP2A6NFY4 417 aa16.43■□□□□ 0.22
RNF40-205ENST00000563909 PRAMEF26H0Y7S4 382 aa16.43■□□□□ 0.22
RNF40-205ENST00000563909 K7ESM1 405 aa16.43■□□□□ 0.22
RNF40-205ENST00000563909 NOBOXO60393 691 aa16.43■□□□□ 0.22
RNF40-205ENST00000563909 RTN2O75298 545 aa16.43■□□□□ 0.22
RNF40-205ENST00000563909 ITGA2BP08514 1039 aa16.43■□□□□ 0.22
RNF40-205ENST00000563909 GTF2H1P32780 548 aa16.43■□□□□ 0.22
RNF40-205ENST00000563909 CSKP41240 450 aa16.43■□□□□ 0.22
RNF40-205ENST00000563909 MARSP56192 900 aaKnown RBP16.43■□□□□ 0.22
RNF40-205ENST00000563909 DLG4P78352 724 aa16.43■□□□□ 0.22
RNF40-205ENST00000563909 CDKN3Q16667 212 aa16.43■□□□□ 0.22
RNF40-205ENST00000563909 STK40Q8N2I9 435 aa16.43■□□□□ 0.22
RNF40-205ENST00000563909 ARHGAP18Q8N392 663 aa16.43■□□□□ 0.22
RNF40-205ENST00000563909 TAF4BQ92750 862 aa16.43■□□□□ 0.22
RNF40-205ENST00000563909 BPIFA3Q9BQP9 254 aa16.43■□□□□ 0.22
RNF40-205ENST00000563909 STOML2Q9UJZ1 356 aa16.43■□□□□ 0.22
RNF40-205ENST00000563909 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.42■□□□□ 0.22
RNF40-205ENST00000563909 EDDM13A0A1B0GTR0 161 aa16.42■□□□□ 0.22
RNF40-205ENST00000563909 SCAMP1O15126 338 aa16.42■□□□□ 0.22
RNF40-205ENST00000563909 TBL1XO60907 577 aa16.42■□□□□ 0.22
RNF40-205ENST00000563909 NEBLO76041 1014 aa16.42■□□□□ 0.22
RNF40-205ENST00000563909 ASLP04424 464 aa16.42■□□□□ 0.22
RNF40-205ENST00000563909 ASPAP45381 313 aa16.42■□□□□ 0.22
RNF40-205ENST00000563909 YWHAGP61981 247 aaKnown RBP eCLIP16.42■□□□□ 0.22
RNF40-205ENST00000563909 ZNF177Q13360 481 aaPredicted RBP16.42■□□□□ 0.22
RNF40-205ENST00000563909 SKIDA1Q1XH10 827 aa16.42■□□□□ 0.22
RNF40-205ENST00000563909 ZACNQ401N2 412 aa16.42■□□□□ 0.22
RNF40-205ENST00000563909 SETMARQ53H47 684 aaPredicted RBP16.42■□□□□ 0.22
RNF40-205ENST00000563909 TCERG1LQ5VWI1 586 aa16.42■□□□□ 0.22
RNF40-205ENST00000563909 SPOPLQ6IQ16 392 aa16.42■□□□□ 0.22
RNF40-205ENST00000563909 CRTC1Q6UUV9 634 aa16.42■□□□□ 0.22
RNF40-205ENST00000563909 C14orf80Q86SX3 495 aa16.42■□□□□ 0.22
RNF40-205ENST00000563909 TWNKQ96RR1 684 aa16.42■□□□□ 0.22
RNF40-205ENST00000563909 DUSP23Q9BVJ7 150 aa16.42■□□□□ 0.22
RNF40-205ENST00000563909 DUSP16Q9BY84 665 aa16.42■□□□□ 0.22
RNF40-205ENST00000563909 GEMIN8Q9NWZ8 242 aaKnown RBP16.42■□□□□ 0.22
RNF40-205ENST00000563909 SRPK3Q9UPE1 567 aa16.42■□□□□ 0.22
RNF40-205ENST00000563909 ERVW-1Q9UQF0 538 aa16.42■□□□□ 0.22
RNF40-205ENST00000563909 DOPEY1Q5JWR5 2465 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 SPTBN1Q01082 2364 aaKnown RBP16.41■□□□□ 0.22
RNF40-205ENST00000563909 SMTNL1A8MU46 457 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 ASS1P00966 412 aaKnown RBP16.41■□□□□ 0.22
RNF40-205ENST00000563909 TRIM49P0CI25 452 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 TRIM49CP0CI26 452 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 SLC5A2P31639 672 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 DRD3P35462 400 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 CTSOP43234 321 aaPredicted RBP16.41■□□□□ 0.22
RNF40-205ENST00000563909 METAP1P53582 386 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 MYL5Q02045 173 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 ZNF542PQ5EBM4 170 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 DCAF17Q5H9S7 520 aaPredicted RBP16.41■□□□□ 0.22
RNF40-205ENST00000563909 C1orf220Q5T0J3 134 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 GUSBP11Q6P575 273 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 RFWD3Q6PCD5 774 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 EFL1Q7Z2Z2 1120 aaKnown RBP16.41■□□□□ 0.22
RNF40-205ENST00000563909 CREBRFQ8IUR6 639 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 KDM1BQ8NB78 822 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 TPCN2Q8NHX9 752 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 LMLNQ96KR4 655 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 MYOCQ99972 504 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 CALN1Q9BXU9 219 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 KDM4CQ9H3R0 1056 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 TMEM8AQ9HCN3 771 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 STIM2Q9P246 746 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 SLCO3A1Q9UIG8 710 aa16.41■□□□□ 0.22
RNF40-205ENST00000563909 INTS6Q9UL03 887 aaKnown RBP16.41■□□□□ 0.22
RNF40-205ENST00000563909 HBS1LQ9Y450 684 aaKnown RBP16.41■□□□□ 0.22
RNF40-205ENST00000563909 CCDC187A0A096LP49 1063 aa16.4■□□□□ 0.22
RNF40-205ENST00000563909 MZF1P28698 734 aaPredicted RBP16.4■□□□□ 0.22
RNF40-205ENST00000563909 ZNF165P49910 485 aa16.4■□□□□ 0.22
RNF40-205ENST00000563909 CYP4F2P78329 520 aa16.4■□□□□ 0.22
RNF40-205ENST00000563909 INCA1Q0VD86 236 aa16.4■□□□□ 0.22
RNF40-205ENST00000563909 CLCA4Q14CN2 919 aa16.4■□□□□ 0.22
RNF40-205ENST00000563909 MPP7Q5T2T1 576 aa16.4■□□□□ 0.22
RNF40-205ENST00000563909 KRT39Q6A163 491 aa16.4■□□□□ 0.22
RNF40-205ENST00000563909 SV2AQ7L0J3 742 aa16.4■□□□□ 0.22
RNF40-205ENST00000563909 TRIM69Q86WT6 500 aa16.4■□□□□ 0.22
RNF40-205ENST00000563909 JAMLQ86YT9 394 aa16.4■□□□□ 0.22
RNF40-205ENST00000563909 MFN1Q8IWA4 741 aa16.4■□□□□ 0.22
RNF40-205ENST00000563909 TRIM59Q8IWR1 403 aa16.4■□□□□ 0.22
RNF40-205ENST00000563909 FIBINQ8TAL6 211 aa16.4■□□□□ 0.22
RNF40-205ENST00000563909 ZNF564Q8TBZ8 553 aaPredicted RBP16.4■□□□□ 0.22
RNF40-205ENST00000563909 NT5C1AQ9BXI3 368 aa16.4■□□□□ 0.22
RNF40-205ENST00000563909 MMRN2Q9H8L6 949 aa16.4■□□□□ 0.22
RNF40-205ENST00000563909 KIF26BQ2KJY2 2108 aa16.4■□□□□ 0.22
RNF40-205ENST00000563909 COL27A1Q8IZC6 1860 aaPredicted RBP16.39■□□□□ 0.22
RNF40-205ENST00000563909 GOLGA6L7A0A1B0GV03 622 aa16.39■□□□□ 0.21
RNF40-205ENST00000563909 SLC31A1O15431 190 aa16.39■□□□□ 0.21
RNF40-205ENST00000563909 PLRG1O43660 514 aaKnown RBP16.39■□□□□ 0.21
RNF40-205ENST00000563909 TCEA3O75764 348 aa16.39■□□□□ 0.21
RNF40-205ENST00000563909 LATS1O95835 1130 aa16.39■□□□□ 0.21
RNF40-205ENST00000563909 SRPRAP08240 638 aaKnown RBP16.39■□□□□ 0.21
RNF40-205ENST00000563909 PIK3CAP42336 1068 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms