RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 APOLD1Q96LR9 279 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 SPAG5Q96R06 1193 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 DDX50Q9BQ39 737 aaKnown RBP12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 TNKS2Q9H2K2 1166 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 DNAJC28Q9NX36 388 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 USP25Q9UHP3 1055 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 VANGL2Q9ULK5 521 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 SATB2Q9UPW6 733 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 ZDHHC9Q9Y397 364 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 U3KQA8 63 aa12.02□□□□□ -0.49
NSMCE1-202ENST00000561960 CPED1A4D0V7 1026 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 ZNF202O95125 648 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 TRUB2O95900 331 aaKnown RBP12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 GIMD1P0DJR0 217 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 TGM2P21980 687 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 RRM1P23921 792 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 NNMTP40261 264 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 FMO5P49326 533 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 TMPRSS3P57727 454 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 APBA1Q02410 837 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 NME3Q13232 169 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 ARID5BQ14865 1188 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 CNGA2Q16280 664 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 SETMARQ53H47 684 aaPredicted RBP12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 PIP5KL1Q5T9C9 394 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 GJB7Q6PEY0 223 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 PRICKLE2Q7Z3G6 844 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 ZNF248Q8NDW4 579 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 ATXN7L3BQ96GX2 97 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 RPRD1AQ96P16 312 aaPredicted RBP12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 NT5C1BQ96P26 610 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 TSG101Q99816 390 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 SIK2Q9H0K1 926 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 ERVMER34-1Q9H9K5 563 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 TMPRSS4Q9NRS4 437 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 ARMCX3Q9UH62 379 aaPredicted RBP12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 SLC25A13Q9UJS0 675 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 VPS28Q9UK41 221 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 ZFR2Q9UPR6 939 aaKnown RBP12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 COQ4Q9Y3A0 265 aa12.01□□□□□ -0.49
NSMCE1-202ENST00000561960 PRAMEF26H0Y7S4 382 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 ERVH48-1M5A8F1 160 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 SMAD6O43541 496 aaKnown RBP12□□□□□ -0.49
NSMCE1-202ENST00000561960 PIAS2O75928 621 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 CNTN5O94779 1100 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 LETM1O95202 739 aaPredicted RBP12□□□□□ -0.49
NSMCE1-202ENST00000561960 PCDH8O95206 1070 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 MYL1P05976 194 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 PAEPP09466 180 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 TBXAS1P24557 533 aaPredicted RBP12□□□□□ -0.49
NSMCE1-202ENST00000561960 SRSF6Q13247 344 aaKnown RBP12□□□□□ -0.49
NSMCE1-202ENST00000561960 ZNF211Q13398 564 aaPredicted RBP12□□□□□ -0.49
NSMCE1-202ENST00000561960 DEFB133Q30KQ1 61 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 ZSCAN23Q3MJ62 389 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 CCDC40Q4G0X9 1142 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 TPRG1LQ5T0D9 272 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 BROXQ5VW32 411 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 KLHL10Q6JEL2 608 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 FBXL22Q6P050 247 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 GUSBP11Q6P575 273 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 GCNT7Q6ZNI0 430 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 SCML4Q8N228 414 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 OXR1Q8N573 874 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 OR4C6Q8NH72 309 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 IFI44Q8TCB0 444 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 MAPK15Q8TD08 544 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 RFFLQ8WZ73 363 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 AZIN2Q96A70 460 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 HIC2Q96JB3 615 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 KREMEN1Q96MU8 473 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 PRMT1Q99873 361 aaKnown RBP12□□□□□ -0.49
NSMCE1-202ENST00000561960 GTPBP4Q9BZE4 634 aaKnown RBP12□□□□□ -0.49
NSMCE1-202ENST00000561960 ABCG4Q9H172 646 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 MUC3BQ9H195 1237 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 DDIT4Q9NX09 232 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 PPM1HQ9ULR3 514 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 ACTL7AQ9Y615 435 aa12□□□□□ -0.49
NSMCE1-202ENST00000561960 SPENQ96T58 3664 aaKnown RBP12□□□□□ -0.49
NSMCE1-202ENST00000561960 RELNP78509 3460 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 POM121BA6NF01 834 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 KCNU1A8MYU2 1149 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 SCAMP1O15126 338 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 RAD51BO15315 384 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 SLC16A3O15427 465 aaKnown RBP11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 THAP12O43422 761 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 SLC28A2O43868 658 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 FBXO21O94952 628 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 SRCP12931 536 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 CD44P16070 742 aaKnown RBP11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 TFE3P19532 575 aaPredicted RBP11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 GPD2P43304 727 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 KRT85P78386 507 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 ENPEPQ07075 957 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 ILKQ13418 452 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 ZNF284Q2VY69 593 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 HS1BP3Q53T59 392 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 LRRC73Q5JTD7 316 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 CDCP2Q5VXM1 449 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 Q6ZSR6 202 aa11.99□□□□□ -0.49
NSMCE1-202ENST00000561960 TFAP2DQ7Z6R9 452 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms