RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 TPMTP51580 245 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 AIF1P55008 147 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 OXCT1P55809 520 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 ST8SIA6P61647 398 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 SPEM2Q0P670 501 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 TSR1Q2NL82 804 aaKnown RBP14.23□□□□□ -0.13
TPM1-230ENST00000561266 C6orf118Q5T5N4 469 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 LAIR1Q6GTX8 287 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 ARMCX6Q7L4S7 300 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.23□□□□□ -0.13
TPM1-230ENST00000561266 METTL3Q86U44 580 aaKnown RBP14.23□□□□□ -0.13
TPM1-230ENST00000561266 SLC41A1Q8IVJ1 513 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 RTL3Q8N8U3 475 aaKnown RBP14.23□□□□□ -0.13
TPM1-230ENST00000561266 DCAF4L2Q8NA75 395 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 RUBCNQ92622 972 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 VOPP1Q96AW1 172 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 RSPH9Q9H1X1 276 aaPredicted RBP14.23□□□□□ -0.13
TPM1-230ENST00000561266 ARRDC1-AS1Q9H2J1 176 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 ZWILCHQ9H900 591 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 CWC15Q9P013 229 aaKnown RBP14.23□□□□□ -0.13
TPM1-230ENST00000561266 CTTNBP2NLQ9P2B4 639 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 SERGEFQ9UGK8 458 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 SARDHQ9UL12 918 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 HS3ST2Q9Y278 367 aa14.23□□□□□ -0.13
TPM1-230ENST00000561266 LAMA1P25391 3075 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 DMXL1Q9Y485 3027 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 EDDM13A0A1B0GTR0 161 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 RCCD1A6NED2 376 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 CBX4O00257 560 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 PRPSAP2O60256 369 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 EPN2O95208 641 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 MAPKAPK2P49137 400 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 VASPP50552 380 aaPredicted RBP14.22□□□□□ -0.13
TPM1-230ENST00000561266 SULT2A1Q06520 285 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 PIGHQ14442 188 aaPredicted RBP14.22□□□□□ -0.13
TPM1-230ENST00000561266 RAD9BQ6WBX8 426 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 Q6ZVU0 165 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 FAM124AQ86V42 546 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 TMEM139Q8IV31 216 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 MMAAQ8IVH4 418 aaKnown RBP14.22□□□□□ -0.13
TPM1-230ENST00000561266 NPWQ8N729 165 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 SPC24Q8NBT2 197 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 SLC35G2Q8TBE7 412 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 HSPH1Q92598 858 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 PRCCQ92733 491 aaPredicted RBP14.22□□□□□ -0.13
TPM1-230ENST00000561266 HMCESQ96FZ2 354 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 ATP13A1Q9HD20 1204 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 TMEM74BQ9NUR3 256 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 ETNK2Q9NVF9 386 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 WSB2Q9NYS7 404 aaPredicted RBP14.22□□□□□ -0.13
TPM1-230ENST00000561266 NCDNQ9UBB6 729 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 IP6K2Q9UHH9 426 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 REXO2Q9Y3B8 237 aaKnown RBP14.22□□□□□ -0.13
TPM1-230ENST00000561266 SHROOM3Q8TF72 1996 aa14.22□□□□□ -0.13
TPM1-230ENST00000561266 TARSL2A2RTX5 802 aaKnown RBP14.21□□□□□ -0.13
TPM1-230ENST00000561266 TMEM110-MUSTN1A8MSY1 372 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 MYO1FO00160 1098 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 EEF2KO00418 725 aaKnown RBP14.21□□□□□ -0.13
TPM1-230ENST00000561266 MID1O15344 667 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 PROSCO94903 275 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 LCA5LO95447 670 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 IGLV3-19P01714 112 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 CTSLP07711 333 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 RETP07949 1114 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 CD48P09326 243 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 ERCC2P18074 760 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 AMPD1P23109 780 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 IL4RP24394 825 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 ACSL1P33121 698 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 ARSEP51690 589 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 TPI1P60174 286 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 KRT83P78385 493 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 MMRN1Q13201 1228 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 DPYSQ14117 519 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 ACAP1Q15027 740 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 ACCSLQ4AC99 568 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 PPP6R3Q5H9R7 873 aaPredicted RBP14.21□□□□□ -0.13
TPM1-230ENST00000561266 IL31Q6EBC2 164 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 ZNF783Q6ZMS7 281 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 ARHGAP36Q6ZRI8 547 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 RFX8Q6ZV50 586 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 ARHGAP12Q8IWW6 846 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 KIAA2013Q8IYS2 634 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 CHST14Q8NCH0 376 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 CTNNBL1Q8WYA6 563 aaPredicted RBP14.21□□□□□ -0.13
TPM1-230ENST00000561266 TOE1Q96GM8 510 aaKnown RBP14.21□□□□□ -0.13
TPM1-230ENST00000561266 CELF6Q96J87 481 aaKnown RBP14.21□□□□□ -0.13
TPM1-230ENST00000561266 PANX2Q96RD6 677 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 EPAS1Q99814 870 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 SLC39A8Q9C0K1 460 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 TNKS2Q9H2K2 1166 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 LRRC19Q9H756 370 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 RXFP3Q9NSD7 469 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 KLHL11Q9NVR0 708 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 UVRAGQ9P2Y5 699 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 SLC25A13Q9UJS0 675 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 RAB23Q9ULC3 237 aa14.21□□□□□ -0.13
TPM1-230ENST00000561266 FCF1Q9Y324 198 aaKnown RBP14.21□□□□□ -0.13
TPM1-230ENST00000561266 ATXN2Q99700 1313 aaKnown RBP14.2□□□□□ -0.14
TPM1-230ENST00000561266 A0A0U1RQJ8 604 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms