RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 CALCAP01258 141 aa17.08■□□□□ 0.32
HERC1-207ENST00000560316 PRR29P0C7W0 189 aa17.08■□□□□ 0.32
HERC1-207ENST00000560316 ZNF18P17022 549 aa17.08■□□□□ 0.32
HERC1-207ENST00000560316 NFKB2Q00653 900 aa17.08■□□□□ 0.32
HERC1-207ENST00000560316 SULT2A1Q06520 285 aa17.08■□□□□ 0.32
HERC1-207ENST00000560316 LRMPQ12912 555 aa17.08■□□□□ 0.32
HERC1-207ENST00000560316 CLN3Q13286 438 aa17.08■□□□□ 0.32
HERC1-207ENST00000560316 NNTQ13423 1086 aa17.08■□□□□ 0.32
HERC1-207ENST00000560316 CDKN3Q16667 212 aa17.08■□□□□ 0.32
HERC1-207ENST00000560316 ZC3H12AQ5D1E8 599 aaKnown RBP17.08■□□□□ 0.32
HERC1-207ENST00000560316 PIP5KL1Q5T9C9 394 aa17.08■□□□□ 0.32
HERC1-207ENST00000560316 Q6ZVU0 165 aa17.08■□□□□ 0.32
HERC1-207ENST00000560316 UBR7Q8N806 425 aa17.08■□□□□ 0.32
HERC1-207ENST00000560316 ARRDC3Q96B67 414 aa17.08■□□□□ 0.32
HERC1-207ENST00000560316 CCDC97Q96F63 343 aaPredicted RBP17.08■□□□□ 0.32
HERC1-207ENST00000560316 USP29Q9HBJ7 922 aa17.08■□□□□ 0.32
HERC1-207ENST00000560316 WDR70Q9NW82 654 aa17.08■□□□□ 0.32
HERC1-207ENST00000560316 DNAJC28Q9NX36 388 aa17.08■□□□□ 0.32
HERC1-207ENST00000560316 ENTPD2Q9Y5L3 495 aa17.08■□□□□ 0.32
HERC1-207ENST00000560316 COL27A1Q8IZC6 1860 aaPredicted RBP17.07■□□□□ 0.32
HERC1-207ENST00000560316 CPED1A4D0V7 1026 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 NEMP2A6NFY4 417 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 CDRT15L2A8MXV6 281 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 MCF2LO15068 1137 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 STX10O60499 249 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 FBXO21O94952 628 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 AKT2P31751 481 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 YWHAEP62258 255 aaKnown RBP17.07■□□□□ 0.32
HERC1-207ENST00000560316 SLC12A1Q13621 1099 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 DLG2Q15700 870 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 ZNF284Q2VY69 593 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 ARL13BQ3SXY8 428 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 ZCWPW2Q504Y3 356 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 COLEC12Q5KU26 742 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 C6orf132Q5T0Z8 1188 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 SYPL2Q5VXT5 272 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 GUSBP11Q6P575 273 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 CRTC1Q6UUV9 634 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 GCNT7Q6ZNI0 430 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 EFL1Q7Z2Z2 1120 aaKnown RBP17.07■□□□□ 0.32
HERC1-207ENST00000560316 CCAR2Q8N163 923 aaKnown RBP17.07■□□□□ 0.32
HERC1-207ENST00000560316 FAM149B1Q96BN6 582 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 DUSP23Q9BVJ7 150 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 EVA1BQ9NVM1 165 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 KIAA1257Q9ULG3 409 aa17.07■□□□□ 0.32
HERC1-207ENST00000560316 A0A1B0GVL5 298 aa17.06■□□□□ 0.32
HERC1-207ENST00000560316 F5H5T6 163 aa17.06■□□□□ 0.32
HERC1-207ENST00000560316 CASC3O15234 703 aaKnown RBP17.06■□□□□ 0.32
HERC1-207ENST00000560316 EFSO43281 561 aa17.06■□□□□ 0.32
HERC1-207ENST00000560316 ATP9BO43861 1147 aa17.06■□□□□ 0.32
HERC1-207ENST00000560316 RHOBTB3O94955 611 aa17.06■□□□□ 0.32
HERC1-207ENST00000560316 APOEP02649 317 aa17.06■□□□□ 0.32
HERC1-207ENST00000560316 CTSLP07711 333 aa17.06■□□□□ 0.32
HERC1-207ENST00000560316 EPB41P11171 864 aaKnown RBP17.06■□□□□ 0.32
HERC1-207ENST00000560316 HNRNPA2B1P22626 353 aaKnown RBP17.06■□□□□ 0.32
HERC1-207ENST00000560316 BRD2P25440 801 aaKnown RBP17.06■□□□□ 0.32
HERC1-207ENST00000560316 PLK1P53350 603 aa17.06■□□□□ 0.32
HERC1-207ENST00000560316 LINC00303Q3SY05 128 aa17.06■□□□□ 0.32
HERC1-207ENST00000560316 DCAF17Q5H9S7 520 aaPredicted RBP17.06■□□□□ 0.32
HERC1-207ENST00000560316 TCERG1LQ5VWI1 586 aa17.06■□□□□ 0.32
HERC1-207ENST00000560316 OR6B2Q6IFH4 312 aa17.06■□□□□ 0.32
HERC1-207ENST00000560316 CXorf57Q6NSI4 855 aaKnown RBP17.06■□□□□ 0.32
HERC1-207ENST00000560316 TMEM270Q6UE05 265 aa17.06■□□□□ 0.32
HERC1-207ENST00000560316 Q6ZSR6 202 aa17.06■□□□□ 0.32
HERC1-207ENST00000560316 HORMAD1Q86X24 394 aa17.06■□□□□ 0.32
HERC1-207ENST00000560316 GUF1Q8N442 669 aaKnown RBP17.06■□□□□ 0.32
HERC1-207ENST00000560316 ZNF548Q8NEK5 533 aaPredicted RBP17.06■□□□□ 0.32
HERC1-207ENST00000560316 ERCC4Q92889 916 aaPredicted RBP17.06■□□□□ 0.32
HERC1-207ENST00000560316 HSFY1Q96LI6 401 aa17.06■□□□□ 0.32
HERC1-207ENST00000560316 SLC25A13Q9UJS0 675 aa17.06■□□□□ 0.32
HERC1-207ENST00000560316 ZFR2Q9UPR6 939 aaKnown RBP17.06■□□□□ 0.32
HERC1-207ENST00000560316 PCDHGA8Q9Y5G5 932 aa17.06■□□□□ 0.32
HERC1-207ENST00000560316 UBR5O95071 2799 aaPredicted RBP17.06■□□□□ 0.32
HERC1-207ENST00000560316 KIF26BQ2KJY2 2108 aa17.06■□□□□ 0.32
HERC1-207ENST00000560316 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.05■□□□□ 0.32
HERC1-207ENST00000560316 RNF225M0QZC1 329 aaPredicted RBP17.05■□□□□ 0.32
HERC1-207ENST00000560316 TERTO14746 1132 aaKnown RBP17.05■□□□□ 0.32
HERC1-207ENST00000560316 ALOX15BO15296 676 aa17.05■□□□□ 0.32
HERC1-207ENST00000560316 TNFSF15O95150 251 aa17.05■□□□□ 0.32
HERC1-207ENST00000560316 MYL1P05976 194 aa17.05■□□□□ 0.32
HERC1-207ENST00000560316 PFKFB1P16118 471 aa17.05■□□□□ 0.32
HERC1-207ENST00000560316 HNRNPKP61978 463 aaKnown RBP eCLIP17.05■□□□□ 0.32
HERC1-207ENST00000560316 ZNF177Q13360 481 aaPredicted RBP17.05■□□□□ 0.32
HERC1-207ENST00000560316 DRAP1Q14919 205 aaPredicted RBP17.05■□□□□ 0.32
HERC1-207ENST00000560316 CNGA2Q16280 664 aa17.05■□□□□ 0.32
HERC1-207ENST00000560316 SEL1L3Q68CR1 1132 aa17.05■□□□□ 0.32
HERC1-207ENST00000560316 RBM44Q6ZP01 1051 aaKnown RBP17.05■□□□□ 0.32
HERC1-207ENST00000560316 PTAR1Q7Z6K3 402 aaPredicted RBP17.05■□□□□ 0.32
HERC1-207ENST00000560316 ABI3BPQ7Z7G0 1075 aa17.05■□□□□ 0.32
HERC1-207ENST00000560316 OR52K2Q8NGK3 314 aa17.05■□□□□ 0.32
HERC1-207ENST00000560316 ALG14Q96F25 216 aa17.05■□□□□ 0.32
HERC1-207ENST00000560316 IFT43Q96FT9 208 aa17.05■□□□□ 0.32
HERC1-207ENST00000560316 BTN2A3PQ96KV6 586 aa17.05■□□□□ 0.32
HERC1-207ENST00000560316 CCNL2Q96S94 520 aaPredicted RBP17.05■□□□□ 0.32
HERC1-207ENST00000560316 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.05■□□□□ 0.32
HERC1-207ENST00000560316 COQ4Q9Y3A0 265 aa17.05■□□□□ 0.32
HERC1-207ENST00000560316 RNF103O00237 685 aa17.04■□□□□ 0.32
HERC1-207ENST00000560316 KPNA3O00505 521 aaPredicted RBP17.04■□□□□ 0.32
HERC1-207ENST00000560316 PAEPP09466 180 aa17.04■□□□□ 0.32
HERC1-207ENST00000560316 VASPP50552 380 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms