RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 TTC12Q9H892 705 aaPredicted RBP1.87□□□□□ -2.11
HIF1A-212ENST00000557538 USP29Q9HBJ7 922 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 ZDHHC7Q9NXF8 308 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 KCND2Q9NZV8 630 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 CNOT7Q9UIV1 285 aaKnown RBP1.87□□□□□ -2.11
HIF1A-212ENST00000557538 AGO2Q9UKV8 859 aaKnown RBP1.87□□□□□ -2.11
HIF1A-212ENST00000557538 A0A1W2PRG0 241 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 STX16-NPEPL1H3BU86 382 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 MASP2O00187 686 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 STX16O14662 325 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 NEURL1O76050 574 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 IFNA2P01563 188 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 IGHDP01880 384 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 POLBP06746 335 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 SLC3A2P08195 630 aaKnown RBP1.87□□□□□ -2.11
HIF1A-212ENST00000557538 LAMP2P13473 410 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 CYP4B1P13584 511 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 TACR3P29371 465 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 PTGER1P34995 402 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 TUBP50607 506 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 GOLGA8FQ08AF8 430 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 SLC12A1Q13621 1099 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 ANXA2RQ3ZCQ2 193 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 RRAGAQ7L523 313 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 RHPN2Q8IUC4 686 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 ARMC8Q8IUR7 673 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 NGEFQ8N5V2 710 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 HVCN1Q96D96 273 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 TRIM44Q96DX7 344 aaPredicted RBP1.87□□□□□ -2.11
HIF1A-212ENST00000557538 ZNF333Q96JL9 665 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 ZFYVE19Q96K21 471 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 ZNF347Q96SE7 839 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 MACROD1Q9BQ69 325 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 TRIM2Q9C040 744 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 PAIP1Q9H074 479 aaKnown RBP1.87□□□□□ -2.11
HIF1A-212ENST00000557538 OSBPL5Q9H0X9 879 aaPredicted RBP1.87□□□□□ -2.11
HIF1A-212ENST00000557538 IKZF4Q9H2S9 585 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 MUC13Q9H3R2 512 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 STN1Q9H668 368 aaKnown RBP1.87□□□□□ -2.11
HIF1A-212ENST00000557538 TBC1D22BQ9NU19 505 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 ASNSD1Q9NWL6 643 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 MPP6Q9NZW5 540 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 RAI14Q9P0K7 980 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 HDAC6Q9UBN7 1215 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 HS3ST3A1Q9Y663 406 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 C17orf102A2RUQ5 167 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 CLEC18AA5D8T8 446 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 C2CD4BA6NLJ0 364 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 TCERG1O14776 1098 aaKnown RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 WNT9BO14905 357 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 DDAH2O95865 285 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 COX7A2P14406 83 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 PTPN2P17706 415 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 CD151P48509 253 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 CCT4P50991 539 aaKnown RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 DCAF7P61962 342 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 ARHGAP8P85298 464 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 CYP4A11Q02928 519 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 AIMP2Q13155 320 aaKnown RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 ZKSCAN8Q15776 578 aaPredicted RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 PFKFB3Q16875 520 aaPredicted RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 TIGD6Q17RP2 521 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 TSTD2Q5T7W7 516 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 H1FNTQ75WM6 255 aaPredicted RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 TFAP2DQ7Z6R9 452 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 HACE1Q8IYU2 909 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 CLEC18CQ8NCF0 446 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 GOLGA1Q92805 767 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 INTS2Q9H0H0 1204 aaKnown RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 TAS2R10Q9NYW0 307 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 RAB21Q9UL25 225 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 CNPY2Q9Y2B0 182 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 UTYO14607 1347 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 ZNF644Q9H582 1327 aaPredicted RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 A0A0G2JK05 382 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 CBY3A6NI87 242 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 AGAP5A6NIR3 686 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 CDRT15L2A8MXV6 281 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 FOXO6A8MYZ6 492 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 SCAMP1O15126 338 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 INPPL1O15357 1258 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 USO1O60763 962 aaKnown RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 CLEC3BP05452 202 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 CELA2AP08217 269 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 FGF2P09038 288 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 ALDOCP09972 364 aaKnown RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 ZNF8P17098 575 aaPredicted RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 CLNS1AP54105 237 aaKnown RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 FHL2Q14192 279 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 GXYLT1Q4G148 440 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 C10orf76Q5T2E6 689 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 STRIP1Q5VSL9 837 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 ZNF280DQ6N043 979 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 FBXO42Q6P3S6 717 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 CASC1Q6TDU7 716 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 NAPRTQ6XQN6 538 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 FAM57BQ71RH2 274 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 KDELC2Q7Z4H8 507 aa1.86□□□□□ -2.11
HIF1A-212ENST00000557538 TBC1D1Q86TI0 1168 aaPredicted RBP1.86□□□□□ -2.11
HIF1A-212ENST00000557538 RPAP2Q8IXW5 612 aaPredicted RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms