RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 GPD1P21695 349 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 GLDCP23378 1020 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 RRM1P23921 792 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 SLC8A1P32418 973 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 ADRA1BP35368 520 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 PRKCIP41743 596 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 GFPT1Q06210 699 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-224ENST00000556737 SCAPQ12770 1279 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 SEMA3BQ13214 749 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 FAM72AQ5TYM5 149 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 DAB2IPQ5VWQ8 1189 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 FAM72DQ6L9T8 149 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 PSAPL1Q6NUJ1 521 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 DNAJC24Q6P3W2 148 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 WDR59Q6PJI9 974 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 Q6ZVU0 165 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 PIP4P1Q86T03 277 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 SETD3Q86TU7 594 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-224ENST00000556737 NLRP14Q86W24 1093 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 FAM72BQ86X60 149 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 MCOLN2Q8IZK6 566 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 MINDY1Q8N5J2 469 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 OR7D4Q8NG98 312 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 FAM172AQ8WUF8 416 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 NTAN1Q96AB6 310 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 BIRC7Q96CA5 298 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 MCEEQ96PE7 176 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 SELENOOQ9BVL4 669 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 GTPBP2Q9BX10 602 aaKnown RBP10.59□□□□□ -0.71
SHMT2-224ENST00000556737 MAGEB5Q9BZ81 275 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 ZYG11BQ9C0D3 744 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 MUC3BQ9H195 1237 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 MIR1-1HGQ9H1L0 117 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 SGK2Q9HBY8 427 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 FBXL12Q9NXK8 326 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 EIF2B4Q9UI10 523 aaKnown RBP10.59□□□□□ -0.71
SHMT2-224ENST00000556737 SLC25A13Q9UJS0 675 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 SARDHQ9UL12 918 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 FZD4Q9ULV1 537 aa10.59□□□□□ -0.71
SHMT2-224ENST00000556737 ILVBLA1L0T0 632 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 SIGLEC16A6NMB1 481 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 UPK3BL1B0FP48 263 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 UPK3BL2E5RIL1 263 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 RNF103O00237 685 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 ALOX15BO15296 676 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 BCAT2O15382 392 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-224ENST00000556737 SMAD6O43541 496 aaKnown RBP10.58□□□□□ -0.72
SHMT2-224ENST00000556737 RNASEH1O60930 286 aaKnown RBP10.58□□□□□ -0.72
SHMT2-224ENST00000556737 SRGAP2O75044 1071 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 RNASEH2AO75792 299 aaKnown RBP10.58□□□□□ -0.72
SHMT2-224ENST00000556737 ADH1BP00325 375 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 CTSLP07711 333 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 CSRP1P21291 193 aaKnown RBP10.58□□□□□ -0.72
SHMT2-224ENST00000556737 C5AR1P21730 350 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 KCNA4P22459 653 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 PMLP29590 882 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 OR1E1P30953 314 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 NOVA1P51513 510 aaKnown RBP10.58□□□□□ -0.72
SHMT2-224ENST00000556737 GALCP54803 685 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 ADPRHP54922 357 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 RPL7AP62424 266 aaKnown RBP10.58□□□□□ -0.72
SHMT2-224ENST00000556737 ARF5P84085 180 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 OGDHQ02218 1023 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 ZNF252P-AS1Q0IIN9 211 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 NR1I3Q14994 352 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 DLG2Q15700 870 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 ASIC2Q16515 512 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 UAP1L1Q3KQV9 507 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 FIGNQ5HY92 759 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 C6orf118Q5T5N4 469 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 N4BP2L1Q5TBK1 243 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-224ENST00000556737 KIAA0895LQ68EN5 471 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 ACAD10Q6JQN1 1059 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 NCEH1Q6PIU2 408 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 LRRC31Q6UY01 552 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 ZNF571Q7Z3V5 609 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-224ENST00000556737 TMC6Q7Z403 805 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 DNAAF5Q86Y56 855 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 MRFAP1L1Q96HT8 127 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 C2orf49Q9BVC5 232 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-224ENST00000556737 OSBPL2Q9H1P3 480 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 NEUROG2Q9H2A3 272 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 EBF2Q9HAK2 575 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 TM9SF3Q9HD45 589 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 OSGEPQ9NPF4 335 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 NDFIP2Q9NV92 336 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 AIPL1Q9NZN9 384 aa10.58□□□□□ -0.72
SHMT2-224ENST00000556737 PLK4O00444 970 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 DDX3XO00571 662 aaKnown RBP eCLIP10.57□□□□□ -0.721e-14■■□□□ 13.5
SHMT2-224ENST00000556737 ATMINO43313 823 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-224ENST00000556737 ZNF821O75541 412 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-224ENST00000556737 LRIG2O94898 1065 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 FSBPO95073 299 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 CD160O95971 181 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 IL1BP01584 269 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 SYPP08247 313 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 CCDC172P0C7W6 258 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 CD59P13987 128 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 GNSP15586 552 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 RHOQP17081 205 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms