RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 FAM118BQ9BPY3 351 aa11.45□□□□□ -0.58
SHMT2-220ENST00000555634 FAM83CQ9BQN1 747 aa11.45□□□□□ -0.58
SHMT2-220ENST00000555634 TMEM121Q9BTD3 319 aa11.45□□□□□ -0.58
SHMT2-220ENST00000555634 CINPQ9BW66 212 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-220ENST00000555634 MAGEB5Q9BZ81 275 aa11.45□□□□□ -0.58
SHMT2-220ENST00000555634 KLC2Q9H0B6 622 aa11.45□□□□□ -0.58
SHMT2-220ENST00000555634 PCDH9Q9HC56 1237 aa11.45□□□□□ -0.58
SHMT2-220ENST00000555634 ABCB8Q9NUT2 735 aa11.45□□□□□ -0.58
SHMT2-220ENST00000555634 ETNK2Q9NVF9 386 aa11.45□□□□□ -0.58
SHMT2-220ENST00000555634 PAK5Q9P286 719 aa11.45□□□□□ -0.58
SHMT2-220ENST00000555634 KLHL8Q9P2G9 620 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-220ENST00000555634 SAE1Q9UBE0 346 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-220ENST00000555634 UBA2Q9UBT2 640 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-220ENST00000555634 PCYOX1Q9UHG3 505 aa11.45□□□□□ -0.58
SHMT2-220ENST00000555634 IPO11Q9UI26 975 aaKnown RBP11.45□□□□□ -0.58
SHMT2-220ENST00000555634 TRHDEQ9UKU6 1024 aa11.45□□□□□ -0.58
SHMT2-220ENST00000555634 DRG1Q9Y295 367 aaKnown RBP11.45□□□□□ -0.58
SHMT2-220ENST00000555634 R3HDM2Q9Y2K5 976 aaKnown RBP11.45□□□□□ -0.58
SHMT2-220ENST00000555634 TTLL3Q9Y4R7 772 aa11.45□□□□□ -0.58
SHMT2-220ENST00000555634 REV3LO60673 3130 aa11.45□□□□□ -0.58
SHMT2-220ENST00000555634 E7EVH7 732 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 PDE2AO00408 941 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-220ENST00000555634 RIOK3O14730 519 aaKnown RBP11.44□□□□□ -0.58
SHMT2-220ENST00000555634 MAP3K6O95382 1288 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 ASLP04424 464 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 APODP05090 189 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 CA4P22748 312 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 HSPA9P38646 679 aaKnown RBP11.44□□□□□ -0.58
SHMT2-220ENST00000555634 LMAN1P49257 510 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 IRAK1P51617 712 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 CLCN6P51797 869 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 KDSRQ06136 332 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 ADCY2Q08462 1091 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 CALCOCO2Q13137 446 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 SERINC3Q13530 473 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 TDGQ13569 410 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 SIX1Q15475 284 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-220ENST00000555634 PITRM1Q5JRX3 1037 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 MARC1Q5VT66 337 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 AFMIDQ63HM1 303 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 CXorf57Q6NSI4 855 aaKnown RBP11.44□□□□□ -0.58
SHMT2-220ENST00000555634 RHBDF2Q6PJF5 856 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 MMGT1Q8N4V1 131 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 RIN3Q8TB24 985 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 RUBCNQ92622 972 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 SLCO2A1Q92959 643 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 ARHGEF2Q92974 986 aaKnown RBP11.44□□□□□ -0.58
SHMT2-220ENST00000555634 TSGA13Q96PP4 275 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 HERPUD2Q9BSE4 406 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 SLC39A8Q9C0K1 460 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 LINC00597Q9H2U6 94 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 C8orf33Q9H7E9 229 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-220ENST00000555634 KCNK12Q9HB15 430 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 TRPV5Q9NQA5 729 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 LIMD1Q9UGP4 676 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 AMACRQ9UHK6 382 aa11.44□□□□□ -0.58
SHMT2-220ENST00000555634 MYO18AQ92614 2054 aaKnown RBP11.44□□□□□ -0.58
SHMT2-220ENST00000555634 GFRA2O00451 464 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 MATN3O15232 486 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 KDELR3O43731 214 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 PRAMEF11O60813 436 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 TULP3O75386 442 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 TUBBP07437 444 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 SRFP11831 508 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 CCNB1P14635 433 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 GLULP15104 373 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 IL9P15248 144 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 MMP13P45452 471 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 RECQLP46063 649 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-220ENST00000555634 TFF2Q03403 129 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 SLC20A2Q08357 652 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 ITKQ08881 620 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 LMAN2Q12907 356 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 OASLQ15646 514 aaKnown RBP11.43□□□□□ -0.58
SHMT2-220ENST00000555634 PLEKHG6Q3KR16 790 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 PCGF5Q86SE9 256 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 RALGPS2Q86X27 583 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-220ENST00000555634 ARHGAP12Q8IWW6 846 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 CCDC33Q8N5R6 958 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 ALLCQ8N6M5 410 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 PAF1Q8N7H5 531 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 NAT16Q8N8M0 369 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 FAM71DQ8N9W8 422 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 ATXN2LQ8WWM7 1075 aaKnown RBP11.43□□□□□ -0.58
SHMT2-220ENST00000555634 ASIC4Q96FT7 647 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 P2RY11Q96G91 374 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 PNKPQ96T60 521 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 LGMNQ99538 433 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 FEM1AQ9BSK4 669 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 CIPCQ9C0C6 399 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 POLR1EQ9GZS1 481 aaKnown RBP11.43□□□□□ -0.58
SHMT2-220ENST00000555634 SEPT3Q9UH03 358 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 RSPH14Q9UHP6 348 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 PLA2G4CQ9UP65 541 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 SLC27A6Q9Y2P4 619 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 MFHAS1Q9Y4C4 1052 aa11.43□□□□□ -0.58
SHMT2-220ENST00000555634 MUC22E2RYF6 1773 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-220ENST00000555634 A0A0A0MRY4 1105 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 TIMM44O43615 452 aa11.42□□□□□ -0.58
SHMT2-220ENST00000555634 MAFKO60675 156 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms