RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	MYRIP	Q8NFW9	859 aa		11.88	□□□□□ -0.51
CNOT2-223	ENST00000550160	RUBCN	Q92622	972 aa		11.88	□□□□□ -0.51
CNOT2-223	ENST00000550160	FGF14	Q92915	247 aa		11.88	□□□□□ -0.51
CNOT2-223	ENST00000550160	ARHGEF2	Q92974	986 aa	Known RBP	11.88	□□□□□ -0.51
CNOT2-223	ENST00000550160	FATE1	Q969F0	183 aa		11.88	□□□□□ -0.51
CNOT2-223	ENST00000550160	RTP4	Q96DX8	246 aa		11.88	□□□□□ -0.51
CNOT2-223	ENST00000550160	P2RY11	Q96G91	374 aa		11.88	□□□□□ -0.51
CNOT2-223	ENST00000550160	RHOXF2	Q9BQY4	288 aa		11.88	□□□□□ -0.51
CNOT2-223	ENST00000550160	EBF3	Q9H4W6	596 aa		11.88	□□□□□ -0.51
CNOT2-223	ENST00000550160	NOL6	Q9H6R4	1146 aa	Known RBP	11.88	□□□□□ -0.51
CNOT2-223	ENST00000550160	BRD9	Q9H8M2	597 aa		11.88	□□□□□ -0.51
CNOT2-223	ENST00000550160	ECT2	Q9H8V3	914 aa		11.88	□□□□□ -0.51
CNOT2-223	ENST00000550160	SEPT10	Q9P0V9	454 aa		11.88	□□□□□ -0.51
CNOT2-223	ENST00000550160	IGSF9	Q9P2J2	1179 aa		11.88	□□□□□ -0.51
CNOT2-223	ENST00000550160	TRHDE	Q9UKU6	1024 aa		11.88	□□□□□ -0.51
CNOT2-223	ENST00000550160	CXorf51A	A0A1B0GTR3	108 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	TARSL2	A2RTX5	802 aa	Known RBP	11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	C2CD4D	B7Z1M9	353 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	RNF103	O00237	685 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	CBX4	O00257	560 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	MATN3	O15232	486 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	KDELR3	O43731	214 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	OPHN1	O60890	802 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	KRT14	P02533	472 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	TUBB	P07437	444 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	CCNB1	P14635	433 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	ACVRL1	P37023	503 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	CSK	P41240	450 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	PTGIR	P43119	386 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	DGKG	P49619	791 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	RENBP	P51606	427 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	RUNX3	Q13761	415 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	RFTN1	Q14699	578 aa	Predicted RBP	11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	P3H1	Q32P28	736 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	ITPRIPL2	Q3MIP1	535 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	TMCO4	Q5TGY1	634 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	TRIM68	Q6AZZ1	485 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	ITPRIPL1	Q6GPH6	555 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	RETSAT	Q6NUM9	610 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	ARHGEF18	Q6ZSZ5	1173 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	NUDT18	Q6ZVK8	323 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	TP53INP2	Q8IXH6	220 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	NETO2	Q8NC67	525 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	BBOF1	Q8ND07	529 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	LRRN4CL	Q8ND94	238 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	OR7D4	Q8NG98	312 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	CSGALNACT1	Q8TDX6	532 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	WFIKKN2	Q8TEU8	576 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	EXOC4	Q96A65	974 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	ACD	Q96AP0	544 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	LRRC45	Q96CN5	670 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	ASIC4	Q96FT7	647 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	ZFYVE19	Q96K21	471 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	ZNF599	Q96NL3	588 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	PPP1R2P1	Q96PQ5	205 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	FEM1A	Q9BSK4	669 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	ABCB8	Q9NUT2	735 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	DNAJC17	Q9NVM6	304 aa	Known RBP	11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	PAK5	Q9P286	719 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	KLHL8	Q9P2G9	620 aa	Predicted RBP	11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	GGA2	Q9UJY4	613 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	DOCK4	Q8N1I0	1966 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160	DOCK8	Q8NF50	2099 aa		11.87	□□□□□ -0.51
CNOT2-223	ENST00000550160		A0A0A0MRY4	1105 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160		A0A0D9SEW6	157 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	C5orf60	A6NFR6	353 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	KCNK1	O00180	336 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	PRAMEF11	O60813	436 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	GCAT	O75600	419 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	PABPC1	P11940	636 aa	Known RBP	11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	VAV1	P15498	845 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	ADCY8	P40145	1251 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	PLK1	P53350	603 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	GDF10	P55107	478 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	IFI35	P80217	286 aa	Predicted RBP	11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	SULT2A1	Q06520	285 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	LMAN2	Q12907	356 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	CALCOCO2	Q13137	446 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	HNRNPD	Q14103	355 aa	Known RBP	11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	ZNF235	Q14590	738 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	PLEKHG6	Q3KR16	790 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	FSCB	Q5H9T9	825 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	MARC1	Q5VT66	337 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	GRAMD4	Q6IC98	578 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	PID1	Q7Z2X4	250 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	METTL3	Q86U44	580 aa	Known RBP	11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	IFT20	Q8IY31	132 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	AHI1	Q8N157	1196 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	GPR161	Q8N6U8	529 aa	Known RBP	11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	OR52K2	Q8NGK3	314 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	CASKIN2	Q8WXE0	1202 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	SPATA13	Q96N96	652 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	ERP44	Q9BS26	406 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	TRIM51	Q9BSJ1	452 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	ACE2	Q9BYF1	805 aa	Predicted RBP	11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	PLA2G2F	Q9BZM2	168 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	C10orf88	Q9H8K7	445 aa		11.86	□□□□□ -0.51
CNOT2-223	ENST00000550160	USP29	Q9HBJ7	922 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms