RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 RHAGQ02094 409 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 NHLH1Q02575 133 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 ZBTB16Q05516 673 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 GALNT2Q10471 571 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 GXYLT1Q4G148 440 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 RUNDC3AQ59EK9 446 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 PRAMEF17Q5VTA0 474 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 GJB7Q6PEY0 223 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 ZNF813Q6ZN06 617 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 RBM44Q6ZP01 1051 aaKnown RBP4.48□□□□□ -1.69
PTCH1-216ENST00000548379 MAATS1Q7Z4T9 603 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 C8orf58Q8NAV2 365 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 IGFBPL1Q8WX77 278 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 KCNJ9Q92806 393 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 ELP4Q96EB1 424 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 RNF125Q96EQ8 232 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 ZNF764Q96H86 408 aaPredicted RBP4.48□□□□□ -1.69
PTCH1-216ENST00000548379 CTDSP1Q9GZU7 261 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 ACAD9Q9H845 621 aa4.48□□□□□ -1.69
PTCH1-216ENST00000548379 ITIH6Q6UXX5 1313 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 KIF14Q15058 1648 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 F5H0A9 414 aaPredicted RBP4.47□□□□□ -1.69
PTCH1-216ENST00000548379 SMIM22K7EJ46 135 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 GUCY1B2O75343 617 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 TMEM63AO94886 807 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 TBX18O95935 607 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 F9P00740 461 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 SLPIP03973 132 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 WEE2P0C1S8 567 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 CAPN3P20807 821 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 RPS6KB1P23443 525 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 ABCD3P28288 659 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 KRT9P35527 623 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 OAZ1P54368 228 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 CASP6P55212 293 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 BYSLQ13895 437 aaKnown RBP4.47□□□□□ -1.69
PTCH1-216ENST00000548379 ANXA2RQ3ZCQ2 193 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 CERKLQ49MI3 558 aaPredicted RBP4.47□□□□□ -1.69
PTCH1-216ENST00000548379 SH2D4BQ5SQS7 431 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 HYIQ5T013 277 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 CC2D1BQ5T0F9 858 aaKnown RBP4.47□□□□□ -1.69
PTCH1-216ENST00000548379 RSRC2Q7L4I2 434 aaKnown RBP4.47□□□□□ -1.69
PTCH1-216ENST00000548379 TBC1D1Q86TI0 1168 aaPredicted RBP4.47□□□□□ -1.69
PTCH1-216ENST00000548379 ARHGEF25Q86VW2 580 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 BRSK2Q8IWQ3 736 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 PNLDC1Q8NA58 520 aaKnown RBP4.47□□□□□ -1.69
PTCH1-216ENST00000548379 SEMA6DQ8NFY4 1073 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 RFWD2Q8NHY2 731 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 BCAS4Q8TDM0 211 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 ZUFSPQ96AP4 578 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 CHFRQ96EP1 664 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 FRMD8Q9BZ67 464 aaPredicted RBP4.47□□□□□ -1.69
PTCH1-216ENST00000548379 TRIM31Q9BZY9 425 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 ZHX3Q9H4I2 956 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 Q9N2J8 555 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 SEMA4BQ9NPR2 832 aaPredicted RBP4.47□□□□□ -1.69
PTCH1-216ENST00000548379 ARL8BQ9NVJ2 186 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 BEX4Q9NWD9 120 aaPredicted RBP4.47□□□□□ -1.69
PTCH1-216ENST00000548379 CNOT7Q9UIV1 285 aaKnown RBP4.47□□□□□ -1.69
PTCH1-216ENST00000548379 CCNB3Q8WWL7 1395 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 PLA2R1Q13018 1463 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 CCDC18Q5T9S5 1454 aa4.47□□□□□ -1.69
PTCH1-216ENST00000548379 PTPRKQ15262 1439 aa4.46□□□□□ -1.69
PTCH1-216ENST00000548379 RICTORQ6R327 1708 aa4.46□□□□□ -1.69
PTCH1-216ENST00000548379 PREX1Q8TCU6 1659 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 KDM5CP41229 1560 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 REREQ9P2R6 1566 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 PLEKHH2Q8IVE3 1493 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 ARHGAP35Q9NRY4 1499 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 WIPF3A6NGB9 483 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 GAGE10A6NGK3 116 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 LINC01548A6NM66 108 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 PLAUP00749 431 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 TACR3P29371 465 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 TYK2P29597 1187 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 ELLP55199 621 aaPredicted RBP4.46□□□□□ -1.7
PTCH1-216ENST00000548379 CAMK1Q14012 370 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 GPR68Q15743 365 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 KIAA1755Q5JYT7 1200 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 MEX3CQ5U5Q3 659 aaKnown RBP4.46□□□□□ -1.7
PTCH1-216ENST00000548379 FAAH2Q6GMR7 532 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 NAPEPLDQ6IQ20 393 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 AADACL2Q6P093 401 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 FAM180BQ6P0A1 224 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 SLC30A9Q6PML9 568 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 DHRS13Q6UX07 377 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 CLEC4GQ6UXB4 293 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 DSTYKQ6XUX3 929 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 H1FNTQ75WM6 255 aaPredicted RBP4.46□□□□□ -1.7
PTCH1-216ENST00000548379 RNF144BQ7Z419 303 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 UBE2Q1Q7Z7E8 422 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 PCGF5Q86SE9 256 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 NEK8Q86SG6 692 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 VPS52Q8N1B4 723 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 TCP11L2Q8N4U5 519 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 ZNF366Q8N895 744 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 BOLLQ8N9W6 283 aaKnown RBP4.46□□□□□ -1.7
PTCH1-216ENST00000548379 SLC16A11Q8NCK7 471 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 ZCCHC10Q8TBK6 192 aa4.46□□□□□ -1.7
PTCH1-216ENST00000548379 NCSTNQ92542 709 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms