RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 HOXC13P31276 330 aa17.46■□□□□ 0.39
PCDHB17P-201ENST00000539533 CA8P35219 290 aa17.46■□□□□ 0.39
PCDHB17P-201ENST00000539533 SERPINB6P35237 376 aa17.46■□□□□ 0.39
PCDHB17P-201ENST00000539533 PPM1AP35813 382 aa17.46■□□□□ 0.39
PCDHB17P-201ENST00000539533 ALDH1A3P47895 512 aa17.46■□□□□ 0.39
PCDHB17P-201ENST00000539533 GALNT2Q10471 571 aa17.46■□□□□ 0.39
PCDHB17P-201ENST00000539533 BBS9Q3SYG4 887 aa17.46■□□□□ 0.39
PCDHB17P-201ENST00000539533 SPATA31D4Q6ZUB0 917 aa17.46■□□□□ 0.39
PCDHB17P-201ENST00000539533 PDIK1LQ8N165 341 aa17.46■□□□□ 0.39
PCDHB17P-201ENST00000539533 C4orf33Q8N1A6 199 aa17.46■□□□□ 0.39
PCDHB17P-201ENST00000539533 C1orf74Q96LT6 269 aa17.46■□□□□ 0.39
PCDHB17P-201ENST00000539533 ANKRD27Q96NW4 1050 aa17.46■□□□□ 0.39
PCDHB17P-201ENST00000539533 RNPEPL1Q9HAU8 725 aa17.46■□□□□ 0.39
PCDHB17P-201ENST00000539533 SENP1Q9P0U3 644 aa17.46■□□□□ 0.39
PCDHB17P-201ENST00000539533 RAD54BQ9Y620 910 aa17.46■□□□□ 0.39
PCDHB17P-201ENST00000539533 MYO18AQ92614 2054 aaKnown RBP17.46■□□□□ 0.39
PCDHB17P-201ENST00000539533 SMAPO00193 183 aa17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 PRRG1O14668 218 aa17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 LILRB3O75022 631 aa17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 APOEP02649 317 aa17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 GNAZP19086 355 aa17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 RPA3P35244 121 aaPredicted RBP17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 GARSP41250 739 aaKnown RBP17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 PPIDQ08752 370 aaKnown RBP17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 TAF11Q15544 211 aa17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 MS4A13Q5J8X5 152 aa17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 ZNF567Q8N184 647 aa17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 KLHL23Q8NBE8 558 aa17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 LRRC8CQ8TDW0 803 aa17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 CEP295NLQ96MC4 621 aa17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 HSFX1Q9UBD0 423 aa17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 ZNF840PA6NDX5 716 aa17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 EIF4E1BA6NMX2 242 aaKnown RBP17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 E7ESA3 106 aa17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 NCAM2O15394 837 aa17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 LUC7L3O95232 432 aaKnown RBP17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 LINGO3P0C6S8 592 aa17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 ABL2P42684 1182 aa17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 TWF1Q12792 350 aa17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 C4orf22Q6V702 233 aa17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 FAM13CQ8NE31 585 aa17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 INSL6Q9Y581 213 aa17.45■□□□□ 0.38
PCDHB17P-201ENST00000539533 LCHNA4D1U4 455 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 KLHL33A6NCF5 533 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 PEX11AO75192 247 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 IGLV3-27P01718 113 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 CSH1P0DML2 217 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 CSH2P0DML3 217 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 T-ENOLP0DO92 83 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 CALB2P22676 271 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 CA4P22748 312 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 MAGEA6P43360 314 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 KCNQ1P51787 676 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 ARHGAP36Q6ZRI8 547 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 CAND1Q86VP6 1230 aaKnown RBP17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 IGDCC3Q8IVU1 814 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 ARHGAP12Q8IWW6 846 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 FBXO36Q8NEA4 188 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 PYROXD1Q8WU10 500 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 C10orf82Q8WW14 230 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 SLC7A6OSQ96CW6 309 aaPredicted RBP17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 HDAC11Q96DB2 347 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 BTN2A3PQ96KV6 586 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 ZBP1Q9H171 429 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 CATSPERBQ9H7T0 1116 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 VPS37BQ9H9H4 285 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 ZMYND8Q9ULU4 1186 aaPredicted RBP17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 CARNS1A5YM72 827 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 DFFAO00273 331 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 FGF10O15520 208 aaPredicted RBP17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 STK10O94804 968 aaKnown RBP17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 CNPP09543 421 aaKnown RBP17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 MX2P20592 715 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 PTPN3P26045 913 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 GPX6P59796 221 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 NRG1Q02297 640 aaPredicted RBP17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 PLD1Q13393 1074 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 SLC1A5Q15758 541 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 TAF12Q16514 161 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 PID1Q7Z2X4 250 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 ZNF683Q8IZ20 524 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 ATP6V0D2Q8N8Y2 350 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 CLP1Q92989 425 aaKnown RBP17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 NAF1Q96HR8 494 aaKnown RBP17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 FERMT1Q9BQL6 677 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 TBC1D10AQ9BXI6 508 aa17.44■□□□□ 0.38
PCDHB17P-201ENST00000539533 CLUHO75153 1309 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 OPHN1O60890 802 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 CSPG5O95196 566 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 GM2AP17900 193 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 SSTR1P30872 391 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 HTR7P34969 479 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 ATP5C1P36542 298 aaKnown RBP17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 GRIA1P42261 906 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 SEMA5AQ13591 1074 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 RAP1GAP2Q684P5 730 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 ZNF449Q6P9G9 518 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 LONP2Q86WA8 852 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 MYRFLQ96LU7 910 aa17.43■□□□□ 0.38
PCDHB17P-201ENST00000539533 OSBPL1AQ9BXW6 950 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms