RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 PKP1Q13835 747 aa5.54□□□□□ -1.52
CCDC7-209ENST00000539197 PWP2Q15269 919 aaKnown RBP5.54□□□□□ -1.52
CCDC7-209ENST00000539197 KIF19Q2TAC6 998 aa5.54□□□□□ -1.52
CCDC7-209ENST00000539197 ZNF284Q2VY69 593 aa5.54□□□□□ -1.52
CCDC7-209ENST00000539197 ZNF569Q5MCW4 686 aa5.54□□□□□ -1.52
CCDC7-209ENST00000539197 WBP2NLQ6ICG8 309 aa5.54□□□□□ -1.52
CCDC7-209ENST00000539197 ANKS1BQ7Z6G8 1248 aa5.54□□□□□ -1.52
CCDC7-209ENST00000539197 HORMAD2Q8N7B1 307 aa5.54□□□□□ -1.52
CCDC7-209ENST00000539197 FAM216AQ8WUB2 273 aa5.54□□□□□ -1.52
CCDC7-209ENST00000539197 INPP4AQ96PE3 977 aaPredicted RBP5.54□□□□□ -1.52
CCDC7-209ENST00000539197 TMEM120AQ9BXJ8 343 aa5.54□□□□□ -1.52
CCDC7-209ENST00000539197 KLHL31Q9H511 634 aa5.54□□□□□ -1.52
CCDC7-209ENST00000539197 DDX31Q9H8H2 851 aaKnown RBP5.54□□□□□ -1.52
CCDC7-209ENST00000539197 OCIAD1Q9NX40 245 aa5.54□□□□□ -1.52
CCDC7-209ENST00000539197 IL36RNQ9UBH0 155 aa5.54□□□□□ -1.52
CCDC7-209ENST00000539197 PCDHGB2Q9Y5G2 931 aa5.54□□□□□ -1.52
CCDC7-209ENST00000539197 A0A0B4J293 547 aa5.53□□□□□ -1.52
CCDC7-209ENST00000539197 HNRNPDLO14979 420 aaKnown RBP5.53□□□□□ -1.52
CCDC7-209ENST00000539197 DNPH1O43598 174 aa5.53□□□□□ -1.52
CCDC7-209ENST00000539197 AVPR1AP37288 418 aa5.53□□□□□ -1.52
CCDC7-209ENST00000539197 SLC39A14Q15043 492 aa5.53□□□□□ -1.52
CCDC7-209ENST00000539197 MPEG1Q2M385 716 aa5.53□□□□□ -1.52
CCDC7-209ENST00000539197 HES6Q96HZ4 224 aa5.53□□□□□ -1.52
CCDC7-209ENST00000539197 RIPOR3Q96MK2 946 aa5.53□□□□□ -1.52
CCDC7-209ENST00000539197 SARGQ9BW04 601 aa5.53□□□□□ -1.52
CCDC7-209ENST00000539197 HIPK3Q9H422 1215 aa5.53□□□□□ -1.52
CCDC7-209ENST00000539197 LZTS1Q9Y250 596 aa5.53□□□□□ -1.52
CCDC7-209ENST00000539197 RAP2CQ9Y3L5 183 aa5.53□□□□□ -1.52
CCDC7-209ENST00000539197 PKP3Q9Y446 797 aa5.53□□□□□ -1.52
CCDC7-209ENST00000539197 CEP83Q9Y592 693 aa5.53□□□□□ -1.52
CCDC7-209ENST00000539197 AGAP5A6NIR3 686 aa5.52□□□□□ -1.53
CCDC7-209ENST00000539197 SLC38A8A6NNN8 435 aa5.52□□□□□ -1.53
CCDC7-209ENST00000539197 KRT36O76013 467 aa5.52□□□□□ -1.53
CCDC7-209ENST00000539197 AMTP48728 403 aa5.52□□□□□ -1.53
CCDC7-209ENST00000539197 HSPA7P48741 367 aa5.52□□□□□ -1.53
CCDC7-209ENST00000539197 NUDT6P53370 316 aa5.52□□□□□ -1.53
CCDC7-209ENST00000539197 ALDH18A1P54886 795 aaKnown RBP5.52□□□□□ -1.53
CCDC7-209ENST00000539197 DLX5P56178 289 aa5.52□□□□□ -1.53
CCDC7-209ENST00000539197 SAFBQ15424 915 aaKnown RBP eCLIP5.52□□□□□ -1.53
CCDC7-209ENST00000539197 HEPHL1Q6MZM0 1159 aa5.52□□□□□ -1.53
CCDC7-209ENST00000539197 ZNF333Q96JL9 665 aa5.52□□□□□ -1.53
CCDC7-209ENST00000539197 HDHD5Q9BXW7 423 aa5.52□□□□□ -1.53
CCDC7-209ENST00000539197 TM7SF3Q9NS93 570 aa5.52□□□□□ -1.53
CCDC7-209ENST00000539197 KLHL42Q9P2K6 505 aa5.52□□□□□ -1.53
CCDC7-209ENST00000539197 KCNJ13O60928 360 aa5.51□□□□□ -1.53
CCDC7-209ENST00000539197 SNRNP70P08621 437 aaKnown RBP5.51□□□□□ -1.53
CCDC7-209ENST00000539197 NPPBP16860 134 aa5.51□□□□□ -1.53
CCDC7-209ENST00000539197 GNLYP22749 145 aa5.51□□□□□ -1.53
CCDC7-209ENST00000539197 CYP2J2P51589 502 aa5.51□□□□□ -1.53
CCDC7-209ENST00000539197 BNC1Q01954 994 aa5.51□□□□□ -1.53
CCDC7-209ENST00000539197 SF3A3Q12874 501 aaKnown RBP eCLIP5.51□□□□□ -1.53
CCDC7-209ENST00000539197 VWA5B1Q5TIE3 1220 aa5.51□□□□□ -1.53
CCDC7-209ENST00000539197 DPP9Q86TI2 863 aa5.51□□□□□ -1.53
CCDC7-209ENST00000539197 NRSN1Q8IZ57 195 aa5.51□□□□□ -1.53
CCDC7-209ENST00000539197 TCP11L2Q8N4U5 519 aa5.51□□□□□ -1.53
CCDC7-209ENST00000539197 CEP76Q8TAP6 659 aa5.51□□□□□ -1.53
CCDC7-209ENST00000539197 IGSF21Q96ID5 467 aa5.51□□□□□ -1.53
CCDC7-209ENST00000539197 FIZ1Q96SL8 496 aa5.51□□□□□ -1.53
CCDC7-209ENST00000539197 IL25Q9H293 177 aa5.51□□□□□ -1.53
CCDC7-209ENST00000539197 Q9N2J8 555 aa5.51□□□□□ -1.53
CCDC7-209ENST00000539197 ZDHHC7Q9NXF8 308 aa5.51□□□□□ -1.53
CCDC7-209ENST00000539197 RAI2Q9Y5P3 530 aa5.51□□□□□ -1.53
CCDC7-209ENST00000539197 BTBD16Q32M84 506 aa5.5□□□□□ -1.53
CCDC7-209ENST00000539197 PLK5Q496M5 336 aa5.5□□□□□ -1.53
CCDC7-209ENST00000539197 RNF144BQ7Z419 303 aa5.5□□□□□ -1.53
CCDC7-209ENST00000539197 PALB2Q86YC2 1186 aa5.5□□□□□ -1.53
CCDC7-209ENST00000539197 MUC20Q8N307 709 aaPredicted RBP5.5□□□□□ -1.53
CCDC7-209ENST00000539197 PARD3BQ8TEW8 1205 aa5.5□□□□□ -1.53
CCDC7-209ENST00000539197 KIAA1191Q96A73 305 aa5.5□□□□□ -1.53
CCDC7-209ENST00000539197 SLC39A10Q9ULF5 831 aa5.5□□□□□ -1.53
CCDC7-209ENST00000539197 BUB3O43684 328 aa5.49□□□□□ -1.53
CCDC7-209ENST00000539197 CGAP01215 116 aa5.49□□□□□ -1.53
CCDC7-209ENST00000539197 UMODP07911 640 aa5.49□□□□□ -1.53
CCDC7-209ENST00000539197 MYZAPP0CAP1 466 aa5.49□□□□□ -1.53
CCDC7-209ENST00000539197 UNGP13051 313 aaPredicted RBP5.49□□□□□ -1.53
CCDC7-209ENST00000539197 NAGAP17050 411 aa5.49□□□□□ -1.53
CCDC7-209ENST00000539197 TUBA1BP68363 451 aa5.49□□□□□ -1.53
CCDC7-209ENST00000539197 ZRSR1Q15695 479 aaKnown RBP5.49□□□□□ -1.53
CCDC7-209ENST00000539197 LONRF1Q17RB8 773 aa5.49□□□□□ -1.53
CCDC7-209ENST00000539197 RFLNBQ8N5W9 214 aa5.49□□□□□ -1.53
CCDC7-209ENST00000539197 MIGA1Q8NAN2 632 aa5.49□□□□□ -1.53
CCDC7-209ENST00000539197 SLC35F5Q8WV83 523 aa5.49□□□□□ -1.53
CCDC7-209ENST00000539197 SEPSECSQ9HD40 501 aaKnown RBP5.49□□□□□ -1.53
CCDC7-209ENST00000539197 TCF7L2Q9NQB0 619 aa5.49□□□□□ -1.53
CCDC7-209ENST00000539197 FNIP2Q9P278 1114 aa5.49□□□□□ -1.53
CCDC7-209ENST00000539197 PCDHA10Q9Y5I2 948 aa5.49□□□□□ -1.53
CCDC7-209ENST00000539197 SRPRBQ9Y5M8 271 aaKnown RBP5.49□□□□□ -1.53
CCDC7-209ENST00000539197 A0A0A0MQY5 61 aa5.48□□□□□ -1.53
CCDC7-209ENST00000539197 LINC01553A4QN01 128 aa5.48□□□□□ -1.53
CCDC7-209ENST00000539197 RASA4BC9J798 803 aa5.48□□□□□ -1.53
CCDC7-209ENST00000539197 RASA4O43374 803 aa5.48□□□□□ -1.53
CCDC7-209ENST00000539197 ASNA1O43681 348 aa5.48□□□□□ -1.53
CCDC7-209ENST00000539197 PLA2G6O60733 806 aa5.48□□□□□ -1.53
CCDC7-209ENST00000539197 SOX30O94993 753 aa5.48□□□□□ -1.53
CCDC7-209ENST00000539197 HOXB9P17482 250 aaPredicted RBP5.48□□□□□ -1.53
CCDC7-209ENST00000539197 PRPH2P23942 346 aa5.48□□□□□ -1.53
CCDC7-209ENST00000539197 OAZ1P54368 228 aa5.48□□□□□ -1.53
CCDC7-209ENST00000539197 FAM171A1Q5VUB5 890 aa5.48□□□□□ -1.53
CCDC7-209ENST00000539197 OR2C3Q8N628 320 aa5.48□□□□□ -1.53
CCDC7-209ENST00000539197 ENDOVQ8N8Q3 282 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms