RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 SPAG5Q96R06 1193 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 HAPLN3Q96S86 360 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 VPS16Q9H269 839 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 MTG2Q9H4K7 406 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 RETREG1Q9H6L5 497 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 FANCLQ9NW38 375 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 FBXL12Q9NXK8 326 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 VANGL2Q9ULK5 521 aa11.1□□□□□ -0.63
CCDC60-202ENST00000535685 PLXNB3Q9ULL4 1909 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 AKAP13Q12802 2813 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 ANKRD11Q6UB99 2663 aaPredicted RBP11.09□□□□□ -0.63
CCDC60-202ENST00000535685 SYNJ2BP-COX16A0A087WUM0 186 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 A0A1W2PPC4 97 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 FAM221BA6H8Z2 402 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 LRRC72A6NJI9 287 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 LGALS16A8MUM7 142 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 MID1O15344 667 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 SLC7A4O43246 635 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 TRIM16O95361 564 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 MBD3O95983 291 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 IGHV4-34P06331 123 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 MMEP08473 750 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 GOT1P17174 413 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 TFE3P19532 575 aaPredicted RBP11.09□□□□□ -0.63
CCDC60-202ENST00000535685 SLC8A1P32418 973 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 FLT3P36888 993 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 SULT1E1P49888 294 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 COPB1P53618 953 aaKnown RBP11.09□□□□□ -0.63
CCDC60-202ENST00000535685 GALCP54803 685 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 FMO1Q01740 532 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 MYL5Q02045 173 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 NRG1Q02297 640 aaPredicted RBP11.09□□□□□ -0.63
CCDC60-202ENST00000535685 CENPCQ03188 943 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 DEUP1Q05D60 604 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 TEAD4Q15561 434 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 STX1AQ16623 288 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 FAM102AQ5T9C2 384 aaPredicted RBP11.09□□□□□ -0.63
CCDC60-202ENST00000535685 TRNP1Q6NT89 227 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 SASS6Q6UVJ0 657 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 THSD4Q6ZMP0 1018 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 ZNF783Q6ZMS7 281 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 C14orf80Q86SX3 495 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 CACUL1Q86Y37 369 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 ANKRD20A12PQ8NF67 263 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 OR52K2Q8NGK3 314 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 OR2T34Q8NGX1 318 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 RPL10LQ96L21 214 aaKnown RBP11.09□□□□□ -0.63
CCDC60-202ENST00000535685 ERGIC2Q96RQ1 377 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 TBCBQ99426 244 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 TKTL2Q9H0I9 626 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 MIR1-1HGQ9H1L0 117 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 NEUROG2Q9H2A3 272 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 TM9SF3Q9HD45 589 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 ANLNQ9NQW6 1124 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 COX16Q9P0S2 106 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 HS3ST2Q9Y278 367 aa11.09□□□□□ -0.63
CCDC60-202ENST00000535685 CHD6Q8TD26 2715 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 FAM208BQ5VWN6 2430 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 MCF2LO15068 1137 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 EPHB6O15197 1021 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 LATO43561 262 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 DFNA5O60443 496 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 CBFA2T3O75081 653 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 F12P00748 615 aaPredicted RBP11.08□□□□□ -0.64
CCDC60-202ENST00000535685 UNGP13051 313 aaPredicted RBP11.08□□□□□ -0.64
CCDC60-202ENST00000535685 CHRNB2P17787 502 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 NUDT1P36639 197 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 STAT1P42224 750 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 STK19P49842 368 aaPredicted RBP11.08□□□□□ -0.64
CCDC60-202ENST00000535685 IRAK1P51617 712 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 RNASE9P60153 205 aaKnown RBP11.08□□□□□ -0.64
CCDC60-202ENST00000535685 COPS2P61201 443 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 POLR2FP61218 127 aaKnown RBP11.08□□□□□ -0.64
CCDC60-202ENST00000535685 RACK1P63244 317 aaKnown RBP11.08□□□□□ -0.64
CCDC60-202ENST00000535685 NCAPHQ15003 741 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 ZNF423Q2M1K9 1284 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 TAF3Q5VWG9 929 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 NAA35Q5VZE5 725 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 LRRC31Q6UY01 552 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 APTXQ7Z2E3 356 aaKnown RBP11.08□□□□□ -0.64
CCDC60-202ENST00000535685 DSG4Q86SJ6 1040 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 CIR1Q86X95 450 aaPredicted RBP11.08□□□□□ -0.64
CCDC60-202ENST00000535685 MMAAQ8IVH4 418 aaKnown RBP11.08□□□□□ -0.64
CCDC60-202ENST00000535685 STK40Q8N2I9 435 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 SH2D3CQ8N5H7 860 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 AADATQ8N5Z0 425 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 OR2I1PQ8NGU4 316 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 CPA5Q8WXQ8 436 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 OR8D1Q8WZ84 308 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 SIK2Q9H0K1 926 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 HSD3B7Q9H2F3 369 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 GAREM1Q9H706 876 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 MAP10Q9P2G4 905 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 PPARGC1AQ9UBK2 798 aaKnown RBP11.08□□□□□ -0.64
CCDC60-202ENST00000535685 ZNF212Q9UDV6 495 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 SERGEFQ9UGK8 458 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 FKBPLQ9UIM3 349 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 SLC25A13Q9UJS0 675 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 PPM1HQ9ULR3 514 aa11.08□□□□□ -0.64
CCDC60-202ENST00000535685 NEUROG3Q9Y4Z2 214 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms