RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 PTP4A2Q12974 167 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 TAF5Q15542 800 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 UAP1L1Q3KQV9 507 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 NAA35Q5VZE5 725 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 DHX40Q8IX18 779 aaKnown RBP10.65□□□□□ -0.7
CSDE1-217ENST00000534699 CFAP52Q8N1V2 620 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 TBATAQ96M53 351 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 PSMB7Q99436 277 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 GTPBP2Q9BX10 602 aaKnown RBP10.65□□□□□ -0.7
CSDE1-217ENST00000534699 VPS16Q9H269 839 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 C6orf106Q9H6K1 298 aaPredicted RBP10.65□□□□□ -0.7
CSDE1-217ENST00000534699 TM7SF3Q9NS93 570 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 XPO7Q9UIA9 1087 aaKnown RBP10.65□□□□□ -0.7
CSDE1-217ENST00000534699 VANGL2Q9ULK5 521 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 ANKRD6Q9Y2G4 727 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 EP300Q09472 2414 aaPredicted RBP10.65□□□□□ -0.7
CSDE1-217ENST00000534699 A0A1B0GTQ1 180 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 TTC34A8MYJ7 566 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 FGF10O15520 208 aaPredicted RBP10.65□□□□□ -0.7
CSDE1-217ENST00000534699 GFPT2O94808 682 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 ADCY5O95622 1261 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 IGHV4-34P06331 123 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 MYBL1P10243 752 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 GPD1P21695 349 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 ACSL1P33121 698 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 PRKCIP41743 596 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 KIAA1161Q6NSJ0 714 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 STK40Q8N2I9 435 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 GALNT15Q8N3T1 639 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 DEFB124Q8NES8 71 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 FNIP1Q8TF40 1166 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 TBC1D31Q96DN5 1066 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 MYEOVQ96EZ4 313 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 AGPAT1Q99943 283 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 SELENOOQ9BVL4 669 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 MUC3BQ9H195 1237 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 SLC6A17Q9H1V8 727 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 GAREM1Q9H706 876 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 ACP6Q9NPH0 428 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 ZNF212Q9UDV6 495 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 EIF2B4Q9UI10 523 aaKnown RBP10.65□□□□□ -0.7
CSDE1-217ENST00000534699 PCOLCE2Q9UKZ9 415 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 HS3ST3A1Q9Y663 406 aa10.65□□□□□ -0.7
CSDE1-217ENST00000534699 BZW2Q9Y6E2 419 aaKnown RBP10.65□□□□□ -0.7
CSDE1-217ENST00000534699 PLXNA2O75051 1894 aa10.65□□□□□ -0.71
CSDE1-217ENST00000534699 A0A1W2PR77 199 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 PRAMEF26H0Y7S4 382 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 MID1O15344 667 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 TNFSF14O43557 240 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 KRT3P12035 628 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 SRCP12931 536 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 CD38P28907 300 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 MAPK8P45983 427 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 ADPRHP54922 357 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 PITX1P78337 314 aaPredicted RBP10.64□□□□□ -0.71
CSDE1-217ENST00000534699 UBXN1Q04323 297 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 NCAPHQ15003 741 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 TRIP6Q15654 476 aaKnown RBP10.64□□□□□ -0.71
CSDE1-217ENST00000534699 DLG2Q15700 870 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 ST3GAL2Q16842 350 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 HLA-BQ31612 363 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 ACAD10Q6JQN1 1059 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 DENND6BQ8NEG7 585 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 GANCQ8TET4 914 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 SYN2Q92777 582 aaPredicted RBP10.64□□□□□ -0.71
CSDE1-217ENST00000534699 NEUROG2Q9H2A3 272 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 CATSPERBQ9H7T0 1116 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 DYRK4Q9NR20 520 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 ADAM22Q9P0K1 906 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 HPCAL4Q9UM19 191 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 CACNA1EQ15878 2313 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 ATXN2Q99700 1313 aaKnown RBP10.64□□□□□ -0.71
CSDE1-217ENST00000534699 ZNF143P52747 638 aaPredicted RBP10.64□□□□□ -0.71
CSDE1-217ENST00000534699 GNA12Q03113 381 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 INO80DQ53TQ3 878 aaPredicted RBP10.64□□□□□ -0.71
CSDE1-217ENST00000534699 MON1BQ7L1V2 547 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 APTXQ7Z2E3 356 aaKnown RBP10.64□□□□□ -0.71
CSDE1-217ENST00000534699 LENG8Q96PV6 779 aaPredicted RBP10.64□□□□□ -0.71
CSDE1-217ENST00000534699 CNPY3Q9BT09 278 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 ADAM33Q9BZ11 813 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 RTN4Q9NQC3 1192 aaKnown RBP10.64□□□□□ -0.71
CSDE1-217ENST00000534699 GDF3Q9NR23 364 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 AIPL1Q9NZN9 384 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 GPR179Q6PRD1 2367 aa10.64□□□□□ -0.71
CSDE1-217ENST00000534699 TCRBV5S1A1TA0A578 114 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 FSBPO95073 299 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 OR1E1P30953 314 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 CHRNA3P32297 505 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 FLT3P36888 993 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 PSMD8P48556 350 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 SERPINH1P50454 418 aaKnown RBP10.63□□□□□ -0.71
CSDE1-217ENST00000534699 TYRO3Q06418 890 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 MMAAQ8IVH4 418 aaKnown RBP10.63□□□□□ -0.71
CSDE1-217ENST00000534699 PIP4K2CQ8TBX8 421 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 RXFP2Q8WXD0 754 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 ARHGEF26Q96DR7 871 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 PCMTD1Q96MG8 357 aaPredicted RBP10.63□□□□□ -0.71
CSDE1-217ENST00000534699 METTL5Q9NRN9 209 aaKnown RBP10.63□□□□□ -0.71
CSDE1-217ENST00000534699 VPS51Q9UID3 782 aa10.63□□□□□ -0.71
CSDE1-217ENST00000534699 SLCO3A1Q9UIG8 710 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms