RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 CNTN5O94779 1100 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 ALDH1A2O94788 518 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 CISD3P0C7P0 127 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 PYGMP11217 842 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 TCF4P15884 667 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 IL4RP24394 825 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 HLA-FP30511 346 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 CHRNA3P32297 505 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 OPRD1P41143 372 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 CSKP41240 450 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 ATP5OP48047 213 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 DNA2P51530 1060 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 GALK1P51570 392 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 CLCN5P51795 746 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 PPIDQ08752 370 aaKnown RBP8.1□□□□□ -1.11
SSBP3-211ENST00000528787 NSUN2Q08J23 767 aaKnown RBP eCLIP8.1□□□□□ -1.11
SSBP3-211ENST00000528787 LMAN2Q12907 356 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 BYSLQ13895 437 aaKnown RBP8.1□□□□□ -1.11
SSBP3-211ENST00000528787 PRPSAP1Q14558 356 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 CCNG2Q16589 344 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 CA9Q16790 459 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 P3H1Q32P28 736 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 FNDC3BQ53EP0 1204 aaKnown RBP8.1□□□□□ -1.11
SSBP3-211ENST00000528787 ALFQ53S48 1182 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 FAM72AQ5TYM5 149 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 MARC1Q5VT66 337 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 DAB2IPQ5VWQ8 1189 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 AFMIDQ63HM1 303 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 NCBP2-AS2Q69YL0 99 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 FAM72DQ6L9T8 149 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 CXorf57Q6NSI4 855 aaKnown RBP8.1□□□□□ -1.11
SSBP3-211ENST00000528787 SERPINA13PQ6UXR4 307 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 SYDE1Q6ZW31 735 aaPredicted RBP8.1□□□□□ -1.11
SSBP3-211ENST00000528787 C14orf80Q86SX3 495 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 FAM72BQ86X60 149 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 CCDC13Q8IYE1 715 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 RASGEF1CQ8N431 466 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 NAT16Q8N8M0 369 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 CCDC89Q8N998 374 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 ALG3Q92685 438 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 BHMTQ93088 406 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 ASIC4Q96FT7 647 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 SRPK1Q96SB4 655 aaKnown RBP8.1□□□□□ -1.11
SSBP3-211ENST00000528787 CINPQ9BW66 212 aaPredicted RBP8.1□□□□□ -1.11
SSBP3-211ENST00000528787 OSBPL1AQ9BXW6 950 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 GOLPH3Q9H4A6 298 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 POLMQ9NP87 494 aaPredicted RBP8.1□□□□□ -1.11
SSBP3-211ENST00000528787 ANLNQ9NQW6 1124 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 KLHL11Q9NVR0 708 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 PLK2Q9NYY3 685 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 IPO11Q9UI26 975 aaKnown RBP8.1□□□□□ -1.11
SSBP3-211ENST00000528787 SCML1Q9UN30 329 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 PACSIN2Q9UNF0 486 aaPredicted RBP8.1□□□□□ -1.11
SSBP3-211ENST00000528787 DRG1Q9Y295 367 aaKnown RBP8.1□□□□□ -1.11
SSBP3-211ENST00000528787 SIT1Q9Y3P8 196 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 SHROOM3Q8TF72 1996 aa8.1□□□□□ -1.11
SSBP3-211ENST00000528787 F5P12259 2224 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 EDDM13A0A1B0GTR0 161 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.09□□□□□ -1.11
SSBP3-211ENST00000528787 CHURC1-FNTBB4DL54 471 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 C1QTNF3-AMACRE9PGA6 284 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 I6L893 689 aaPredicted RBP8.09□□□□□ -1.11
SSBP3-211ENST00000528787 SMAPO00193 183 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 SCAMP3O14828 347 aaKnown RBP8.09□□□□□ -1.11
SSBP3-211ENST00000528787 MATN3O15232 486 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 PRAMEF11O60813 436 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 IGSF6O95976 241 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 ATP1A1P05023 1023 aaKnown RBP8.09□□□□□ -1.11
SSBP3-211ENST00000528787 ITGAVP06756 1048 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 CD48P09326 243 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 NTSR1P30989 418 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 CSNK1DP48730 415 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 FNTAP49354 379 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 SERPINH1P50454 418 aaKnown RBP8.09□□□□□ -1.11
SSBP3-211ENST00000528787 SUOXP51687 545 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 EIF3EP60228 445 aaKnown RBP8.09□□□□□ -1.11
SSBP3-211ENST00000528787 DYNLT1P63172 113 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 ZBTB16Q05516 673 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 KDSRQ06136 332 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 AP1B1Q10567 949 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 MMRN1Q13201 1228 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 KLF1Q13351 362 aaPredicted RBP8.09□□□□□ -1.11
SSBP3-211ENST00000528787 UBXN2BQ14CS0 331 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 NOMO1Q15155 1222 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 PON2Q15165 354 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 SLC14A2Q15849 920 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 ACCSLQ4AC99 568 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 ATP13A4Q4VNC1 1196 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 RAB6CQ53S08 254 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 SLC45A4Q5BKX6 768 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 FAM46CQ5VWP2 391 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 TXNRD3NBQ6F5E7 133 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 DARS2Q6PI48 645 aaKnown RBP8.09□□□□□ -1.11
SSBP3-211ENST00000528787 POTEHQ6S545 545 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 MAMSTRQ6ZN01 415 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 TRIM67Q6ZTA4 783 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 GSTA5Q7RTV2 222 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 MAATS1Q7Z4T9 603 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 CHPFQ8IZ52 775 aa8.09□□□□□ -1.11
SSBP3-211ENST00000528787 SIX5Q8N196 739 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms