RNA–Protein interactions for RNA: ENST00000526977.5

VPS28-207, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-207ENST00000526977 FRMD8Q9BZ67 464 aaPredicted RBP19.32■□□□□ 0.68
VPS28-207ENST00000526977 SMPD4Q9NXE4 827 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 VANGL2Q9ULK5 521 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 IGLV3-10A0A075B6K4 115 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 PDK1Q15118 436 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 ANKRD20A2Q5SQ80 823 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 ANKRD20A1Q5TYW2 823 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 ANKRD20A3Q5VUR7 823 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 RAP1GAP2Q684P5 730 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 FBXL22Q6P050 247 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 C14orf80Q86SX3 495 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 TP53INP2Q8IXH6 220 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 ZNF683Q8IZ20 524 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 LZTR1Q8N653 840 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 MCUQ8NE86 351 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 TCEAL4Q96EI5 215 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 ZYG11BQ9C0D3 744 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 PRDM12Q9H4Q4 367 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 RETREG1Q9H6L5 497 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 INTS9Q9NV88 658 aaKnown RBP19.32■□□□□ 0.68
VPS28-207ENST00000526977 SLC24A2Q9UI40 661 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 NEU3Q9UQ49 428 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 CHMP2BQ9UQN3 213 aa19.32■□□□□ 0.68
VPS28-207ENST00000526977 DRGXA6NNA5 263 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 WASH4PA8MWX3 477 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 NCAM2O15394 837 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 KLKB1P03952 638 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 TACR2P21452 398 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 AVPR1AP37288 418 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 CCT5P48643 541 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 AP1B1Q10567 949 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 RASA2Q15283 850 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 TEAD2Q15562 447 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 SLC5A9Q2M3M2 681 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 TCEAL5Q5H9L2 206 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 ARTNQ5T4W7 220 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 ADGRF1Q5T601 910 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 TMC5Q6UXY8 1006 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 ARHGEF18Q6ZSZ5 1173 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 CHSY1Q86X52 802 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 CMTM8Q8IZV2 173 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 C12orf76Q8N812 135 aaPredicted RBP19.31■□□□□ 0.68
VPS28-207ENST00000526977 FBF1Q8TES7 1133 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 P2RY11Q96G91 374 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 PPCSQ9HAB8 311 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 STOML2Q9UJZ1 356 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 LSM7Q9UK45 103 aaKnown RBP19.31■□□□□ 0.68
VPS28-207ENST00000526977 AGO1Q9UL18 857 aaKnown RBP19.31■□□□□ 0.68
VPS28-207ENST00000526977 ZNF510Q9Y2H8 683 aa19.31■□□□□ 0.68
VPS28-207ENST00000526977 A0A0A0MRY4 1105 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 F5H5T6 163 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 FAM107AO95990 144 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 BRAFP15056 766 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 GEMIN4P57678 1058 aaKnown RBP19.3■□□□□ 0.68
VPS28-207ENST00000526977 HYAL1Q12794 435 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 MPP2Q14168 576 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 TMED2Q15363 201 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 C5orf22Q49AR2 442 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 STXBP5Q5T5C0 1151 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 NADSYN1Q6IA69 706 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 CCNYQ8ND76 341 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 SPATA13Q96N96 652 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 ACSS3Q9H6R3 686 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 FETUBQ9UGM5 382 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 RSPH14Q9UHP6 348 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 ARHGAP26Q9UNA1 814 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 MRPS23Q9Y3D9 190 aaKnown RBP19.3■□□□□ 0.68
VPS28-207ENST00000526977 ACTL7BQ9Y614 415 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 CDH23Q9H251 3354 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 TMEM120BA0PK00 339 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 IRF1P10914 325 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 RHOQP17081 205 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 NTHL1P78549 312 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 SEMA5AQ13591 1074 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 FAM133BQ5BKY9 247 aaKnown RBP19.3■□□□□ 0.68
VPS28-207ENST00000526977 SRRM1Q8IYB3 904 aaKnown RBP19.3■□□□□ 0.68
VPS28-207ENST00000526977 RTL3Q8N8U3 475 aaKnown RBP19.3■□□□□ 0.68
VPS28-207ENST00000526977 ADAMTS19Q8TE59 1207 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 ZNF473Q8WTR7 871 aaKnown RBP19.3■□□□□ 0.68
VPS28-207ENST00000526977 MRRFQ96E11 262 aaKnown RBP19.3■□□□□ 0.68
VPS28-207ENST00000526977 RPRD1AQ96P16 312 aaPredicted RBP19.3■□□□□ 0.68
VPS28-207ENST00000526977 KCNK9Q9NPC2 374 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 OBSL1O75147 1896 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 ATG2AQ2TAZ0 1938 aa19.3■□□□□ 0.68
VPS28-207ENST00000526977 RASA4BC9J798 803 aa19.29■□□□□ 0.68
VPS28-207ENST00000526977 NRG2O14511 850 aaPredicted RBP19.29■□□□□ 0.68
VPS28-207ENST00000526977 RASA4O43374 803 aa19.29■□□□□ 0.68
VPS28-207ENST00000526977 ZNF189O75820 626 aaPredicted RBP19.29■□□□□ 0.68
VPS28-207ENST00000526977 TPSB2P20231 275 aa19.29■□□□□ 0.68
VPS28-207ENST00000526977 MX2P20592 715 aa19.29■□□□□ 0.68
VPS28-207ENST00000526977 ZXDBP98169 803 aa19.29■□□□□ 0.68
VPS28-207ENST00000526977 WASHC5Q12768 1159 aa19.29■□□□□ 0.68
VPS28-207ENST00000526977 NR1H3Q13133 447 aa19.29■□□□□ 0.68
VPS28-207ENST00000526977 TPSAB1Q15661 275 aa19.29■□□□□ 0.68
VPS28-207ENST00000526977 HTR3DQ70Z44 454 aa19.29■□□□□ 0.68
VPS28-207ENST00000526977 TRABD2AQ86V40 505 aa19.29■□□□□ 0.68
VPS28-207ENST00000526977 BRD8Q9H0E9 1235 aa19.29■□□□□ 0.68
VPS28-207ENST00000526977 SH3BP1Q9Y3L3 701 aa19.29■□□□□ 0.68
VPS28-207ENST00000526977 DENND4CQ5VZ89 1909 aa19.29■□□□□ 0.68
VPS28-207ENST00000526977 GOLGA6L7A0A1B0GV03 622 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms