RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 LINC00303Q3SY05 128 aa11.97□□□□□ -0.49
SDCBP-211ENST00000523441 ZC3H12AQ5D1E8 599 aaKnown RBP11.97□□□□□ -0.49
SDCBP-211ENST00000523441 DCAF17Q5H9S7 520 aaPredicted RBP11.97□□□□□ -0.49
SDCBP-211ENST00000523441 PERM1Q5SV97 790 aa11.97□□□□□ -0.49
SDCBP-211ENST00000523441 SEL1L3Q68CR1 1132 aa11.97□□□□□ -0.49
SDCBP-211ENST00000523441 PMF1Q6P1K2 205 aa11.97□□□□□ -0.49
SDCBP-211ENST00000523441 RBM44Q6ZP01 1051 aaKnown RBP11.97□□□□□ -0.49
SDCBP-211ENST00000523441 Q6ZSR6 202 aa11.97□□□□□ -0.49
SDCBP-211ENST00000523441 KDM1BQ8NB78 822 aa11.97□□□□□ -0.49
SDCBP-211ENST00000523441 LMX1AQ8TE12 382 aa11.97□□□□□ -0.49
SDCBP-211ENST00000523441 DQX1Q8TE96 717 aaKnown RBP11.97□□□□□ -0.49
SDCBP-211ENST00000523441 PAGE5Q96GU1 130 aa11.97□□□□□ -0.49
SDCBP-211ENST00000523441 PRR11Q96HE9 360 aaPredicted RBP11.97□□□□□ -0.49
SDCBP-211ENST00000523441 ZSCAN16Q9H4T2 348 aaPredicted RBP11.97□□□□□ -0.49
SDCBP-211ENST00000523441 EPB41L5Q9HCM4 733 aa11.97□□□□□ -0.49
SDCBP-211ENST00000523441 ST7Q9NRC1 585 aa11.97□□□□□ -0.49
SDCBP-211ENST00000523441 TPX2Q9ULW0 747 aaKnown RBP11.97□□□□□ -0.49
SDCBP-211ENST00000523441 ZFC3H1O60293 1989 aaKnown RBP11.97□□□□□ -0.49
SDCBP-211ENST00000523441 C10orf142B7Z368 130 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 TERTO14746 1132 aaKnown RBP11.96□□□□□ -0.49
SDCBP-211ENST00000523441 SCAMP1O15126 338 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 SLC7A4O43246 635 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 EFSO43281 561 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 ENDOD1O94919 500 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 GJB6O95452 261 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 APOEP02649 317 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 GP1BAP07359 652 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 SETSIPP0DME0 302 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 HGFP14210 728 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 CYP4F2P78329 520 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 CENPCQ03188 943 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 ADAM9Q13443 819 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 CUL2Q13617 745 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 DLG2Q15700 870 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 ARL13BQ3SXY8 428 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 GCNT7Q6ZNI0 430 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 TAC4Q86UU9 113 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 VASH2Q86V25 355 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 PTRH1Q86Y79 214 aaKnown RBP11.96□□□□□ -0.49
SDCBP-211ENST00000523441 CCAR2Q8N163 923 aaKnown RBP11.96□□□□□ -0.49
SDCBP-211ENST00000523441 TTC39CQ8N584 583 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 ZNF548Q8NEK5 533 aaPredicted RBP11.96□□□□□ -0.49
SDCBP-211ENST00000523441 GRIN3AQ8TCU5 1115 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 FRS2Q8WU20 508 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 SNRNP27Q8WVK2 155 aaKnown RBP11.96□□□□□ -0.49
SDCBP-211ENST00000523441 KCTD13Q8WZ19 329 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 TFAP2BQ92481 460 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 RNF34Q969K3 372 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 PPP1R13BQ96KQ4 1090 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 SERPINB11Q96P15 392 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 KDM4CQ9H3R0 1056 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 PCDHA7Q9UN72 937 aa11.96□□□□□ -0.49
SDCBP-211ENST00000523441 TRPM6Q9BX84 2022 aa11.96□□□□□ -0.5
SDCBP-211ENST00000523441 TEX15Q9BXT5 2789 aa11.96□□□□□ -0.5
SDCBP-211ENST00000523441 F5H5T6 163 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 RNF103O00237 685 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 O00370 1275 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 PRR29P0C7W0 189 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 VDRP11473 427 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 HNRNPA2B1P22626 353 aaKnown RBP11.95□□□□□ -0.5
SDCBP-211ENST00000523441 BRD2P25440 801 aaKnown RBP11.95□□□□□ -0.5
SDCBP-211ENST00000523441 NUDT1P36639 197 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 GGCXP38435 758 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 HNRNPKP61978 463 aaKnown RBP eCLIP11.95□□□□□ -0.5
SDCBP-211ENST00000523441 C1orf61Q13536 156 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 ZNF284Q2VY69 593 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 PIP5KL1Q5T9C9 394 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 SYPL2Q5VXT5 272 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 RESP18Q5W5W9 173 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 ZCCHC8Q6NZY4 707 aaKnown RBP11.95□□□□□ -0.5
SDCBP-211ENST00000523441 TMEM270Q6UE05 265 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 ZNF574Q6ZN55 896 aaPredicted RBP11.95□□□□□ -0.5
SDCBP-211ENST00000523441 HORMAD1Q86X24 394 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 TMEM145Q8NBT3 493 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 WDR36Q8NI36 951 aaKnown RBP11.95□□□□□ -0.5
SDCBP-211ENST00000523441 DUSP23Q9BVJ7 150 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 PREBQ9HCU5 417 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 DYRK4Q9NR20 520 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 ANKMY1Q9P2S6 941 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 VPS28Q9UK41 221 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 PPM1HQ9ULR3 514 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 ZFR2Q9UPR6 939 aaKnown RBP11.95□□□□□ -0.5
SDCBP-211ENST00000523441 TLR6Q9Y2C9 796 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 PCDHB4Q9Y5E5 795 aa11.95□□□□□ -0.5
SDCBP-211ENST00000523441 MORC2Q9Y6X9 1032 aaPredicted RBP11.95□□□□□ -0.5
SDCBP-211ENST00000523441 POM121BA6NF01 834 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 A6NNZ2 444 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 CDRT15L2A8MXV6 281 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 H3BM21 787 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 ACTN4O43707 911 aaKnown RBP11.94□□□□□ -0.5
SDCBP-211ENST00000523441 YEATS4O95619 227 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 FYNP06241 537 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 CTSLP07711 333 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 SLC5A2P31639 672 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 IRAK1P51617 712 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 TLE1Q04724 770 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 SPIDRQ14159 915 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 NR0B2Q15466 257 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 CBWD6Q4V339 395 aa11.94□□□□□ -0.5
SDCBP-211ENST00000523441 CBWD3Q5JTY5 395 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms