RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 HAUS1Q96CS2 278 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 CELF6Q96J87 481 aaKnown RBP15.69■□□□□ 0.1
LSM1-203ENST00000520755 OLFM3Q96PB7 478 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 MUC3BQ9H195 1237 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 LRRC19Q9H756 370 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 DTLQ9NZJ0 730 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 TBC1D30Q9Y2I9 924 aa15.69■□□□□ 0.1
LSM1-203ENST00000520755 URI1O94763 535 aaPredicted RBP15.68■□□□□ 0.1
LSM1-203ENST00000520755 POLR2EP19388 210 aaKnown RBP15.68■□□□□ 0.1
LSM1-203ENST00000520755 TGM2P21980 687 aa15.68■□□□□ 0.1
LSM1-203ENST00000520755 MZF1P28698 734 aaPredicted RBP15.68■□□□□ 0.1
LSM1-203ENST00000520755 RPS9P46781 194 aaKnown RBP15.68■□□□□ 0.1
LSM1-203ENST00000520755 OXCT1P55809 520 aa15.68■□□□□ 0.1
LSM1-203ENST00000520755 PITRM1Q5JRX3 1037 aa15.68■□□□□ 0.1
LSM1-203ENST00000520755 RNF219Q5W0B1 726 aaPredicted RBP15.68■□□□□ 0.1
LSM1-203ENST00000520755 EGFLAMQ63HQ2 1017 aa15.68■□□□□ 0.1
LSM1-203ENST00000520755 TMEM215Q68D42 235 aa15.68■□□□□ 0.1
LSM1-203ENST00000520755 MBLAC2Q68D91 279 aa15.68■□□□□ 0.1
LSM1-203ENST00000520755 KIAA0907Q7Z7F0 614 aaPredicted RBP15.68■□□□□ 0.1
LSM1-203ENST00000520755 ADIPOR2Q86V24 386 aa15.68■□□□□ 0.1
LSM1-203ENST00000520755 APCDD1Q8J025 514 aa15.68■□□□□ 0.1
LSM1-203ENST00000520755 CCDC33Q8N5R6 958 aa15.68■□□□□ 0.1
LSM1-203ENST00000520755 SORCS1Q8WY21 1168 aa15.68■□□□□ 0.1
LSM1-203ENST00000520755 FAM118BQ9BPY3 351 aa15.68■□□□□ 0.1
LSM1-203ENST00000520755 CHRDQ9H2X0 955 aa15.68■□□□□ 0.1
LSM1-203ENST00000520755 RETREG1Q9H6L5 497 aa15.68■□□□□ 0.1
LSM1-203ENST00000520755 ELOVL2Q9NXB9 296 aa15.68■□□□□ 0.1
LSM1-203ENST00000520755 DLGAP2Q9P1A6 1054 aa15.68■□□□□ 0.1
LSM1-203ENST00000520755 CDC23Q9UJX2 597 aa15.68■□□□□ 0.1
LSM1-203ENST00000520755 INTS6Q9UL03 887 aaKnown RBP15.68■□□□□ 0.1
LSM1-203ENST00000520755 MRFAP1Q9Y605 127 aa15.68■□□□□ 0.1
LSM1-203ENST00000520755 APOC4-APOC2K7ER74 178 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 TJP3O95049 919 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 APOC2P02655 101 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 AVPR2P30518 371 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 ACVRL1P37023 503 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 CETN2P41208 172 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 MAGEA9P43362 315 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 KIR2DL1P43626 348 aaPredicted RBP15.67■□□□□ 0.1
LSM1-203ENST00000520755 OTUD4Q01804 1114 aaKnown RBP15.67■□□□□ 0.1
LSM1-203ENST00000520755 SLC12A1Q13621 1099 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 EIF4HQ15056 248 aaKnown RBP15.67■□□□□ 0.1
LSM1-203ENST00000520755 NOMO1Q15155 1222 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 LONRF2Q1L5Z9 754 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 PLEKHG6Q3KR16 790 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 PKN3Q6P5Z2 889 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 ARHGAP36Q6ZRI8 547 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 SETD3Q86TU7 594 aaPredicted RBP15.67■□□□□ 0.1
LSM1-203ENST00000520755 ALLCQ8N6M5 410 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 ZNF513Q8N8E2 541 aaPredicted RBP15.67■□□□□ 0.1
LSM1-203ENST00000520755 OR7D4Q8NG98 312 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 CCDC26Q8TAB7 109 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 ACTL9Q8TC94 416 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 USP33Q8TEY7 942 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 CYB5D2Q8WUJ1 264 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 LRRN4Q8WUT4 740 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 UCMAQ8WVF2 138 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 ATG4AQ8WYN0 398 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 ALG14Q96F25 216 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 FEM1AQ9BSK4 669 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 LRFN3Q9BTN0 628 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 MAK16Q9BXY0 300 aaKnown RBP15.67■□□□□ 0.1
LSM1-203ENST00000520755 SLC39A8Q9C0K1 460 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 PRDM16Q9HAZ2 1276 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 VPS28Q9UK41 221 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 HCN2Q9UL51 889 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 STARD13Q9Y3M8 1113 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 OR51B4Q9Y5P0 310 aa15.67■□□□□ 0.1
LSM1-203ENST00000520755 A0A0D9SEW6 157 aa15.66■□□□□ 0.1
LSM1-203ENST00000520755 RASA4BC9J798 803 aa15.66■□□□□ 0.1
LSM1-203ENST00000520755 RASA4O43374 803 aa15.66■□□□□ 0.1
LSM1-203ENST00000520755 KLF8O95600 359 aaPredicted RBP15.66■□□□□ 0.1
LSM1-203ENST00000520755 ZFXP17010 805 aaPredicted RBP15.66■□□□□ 0.1
LSM1-203ENST00000520755 SERPINB6P35237 376 aa15.66■□□□□ 0.1
LSM1-203ENST00000520755 WASP42768 502 aa15.66■□□□□ 0.1
LSM1-203ENST00000520755 MRPS21P82921 87 aaKnown RBP15.66■□□□□ 0.1
LSM1-203ENST00000520755 GNA12Q03113 381 aa15.66■□□□□ 0.1
LSM1-203ENST00000520755 GALNT2Q10471 571 aa15.66■□□□□ 0.1
LSM1-203ENST00000520755 MTAPQ13126 283 aa15.66■□□□□ 0.1
LSM1-203ENST00000520755 GAS6Q14393 721 aa15.66■□□□□ 0.1
LSM1-203ENST00000520755 DMC1Q14565 340 aa15.66■□□□□ 0.1
LSM1-203ENST00000520755 PRELID2Q8N945 189 aa15.66■□□□□ 0.1
LSM1-203ENST00000520755 TXNDC5Q8NBS9 432 aaKnown RBP15.66■□□□□ 0.1
LSM1-203ENST00000520755 HMCESQ96FZ2 354 aa15.66■□□□□ 0.1
LSM1-203ENST00000520755 ACOX2Q99424 681 aa15.66■□□□□ 0.1
LSM1-203ENST00000520755 SPON2Q9BUD6 331 aa15.66■□□□□ 0.1
LSM1-203ENST00000520755 RRAGDQ9NQL2 400 aaPredicted RBP15.66■□□□□ 0.1
LSM1-203ENST00000520755 SPATA6Q9NWH7 488 aaPredicted RBP15.66■□□□□ 0.1
LSM1-203ENST00000520755 HEY1Q9Y5J3 304 aa15.66■□□□□ 0.1
LSM1-203ENST00000520755 CKAP5Q14008 2032 aa15.65■□□□□ 0.1
LSM1-203ENST00000520755 ILVBLA1L0T0 632 aa15.65■□□□□ 0.1
LSM1-203ENST00000520755 TIMM44O43615 452 aa15.65■□□□□ 0.1
LSM1-203ENST00000520755 RAMP2O60895 175 aa15.65■□□□□ 0.1
LSM1-203ENST00000520755 ATG13O75143 517 aa15.65■□□□□ 0.1
LSM1-203ENST00000520755 ATP5BP06576 529 aaKnown RBP15.65■□□□□ 0.1
LSM1-203ENST00000520755 GLDCP23378 1020 aa15.65■□□□□ 0.1
LSM1-203ENST00000520755 CTSOP43234 321 aaPredicted RBP15.65■□□□□ 0.1
LSM1-203ENST00000520755 NDST2P52849 883 aa15.65■□□□□ 0.1
LSM1-203ENST00000520755 ZNF783Q6ZMS7 281 aa15.65■□□□□ 0.1
LSM1-203ENST00000520755 B4GALNT4Q76KP1 1039 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms