RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 RIBC2Q9H4K1 309 aa11.19□□□□□ -0.62
TRIM41-209ENST00000515834 ATP13A3Q9H7F0 1226 aa11.19□□□□□ -0.62
TRIM41-209ENST00000515834 CDHR5Q9HBB8 845 aa11.19□□□□□ -0.62
TRIM41-209ENST00000515834 AVILO75366 819 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 CATP04040 527 aaKnown RBP11.18□□□□□ -0.62
TRIM41-209ENST00000515834 HSD17B3P37058 310 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 SLC1A6P48664 564 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 ACAP2Q15057 778 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 PSMD5Q16401 504 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 N4BP2L1Q5TBK1 243 aaPredicted RBP11.18□□□□□ -0.62
TRIM41-209ENST00000515834 EID3Q8N140 333 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 GPR156Q8NFN8 814 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 NRCAMQ92823 1304 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 CACNB4O00305 520 aaPredicted RBP11.18□□□□□ -0.62
TRIM41-209ENST00000515834 PROSCO94903 275 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 CNTFP26441 200 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 GABRR2P28476 465 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 ABRAQ8N0Z2 381 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 TMEM86AQ8N2M4 240 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 ZNF671Q8TAW3 534 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 QRFPRQ96P65 431 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 SIKE1Q9BRV8 207 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 EHD4Q9H223 541 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 ELOVL2Q9NXB9 296 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 SESN1Q9Y6P5 492 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 PDE2AO00408 941 aaPredicted RBP11.18□□□□□ -0.62
TRIM41-209ENST00000515834 EPN2O95208 641 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 ADH1CP00326 375 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 TTC23Q5W5X9 447 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 CLIC5Q9NZA1 410 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 BCLAF3A2AJT9 711 aaKnown RBP11.18□□□□□ -0.62
TRIM41-209ENST00000515834 IRF6O14896 467 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 ZNF862O60290 1169 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 GJB6O95452 261 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 APODP05090 189 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 MYBL2P10244 700 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 ITPKBP27987 946 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 S100A3P33764 101 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 CHKAP35790 457 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 DSG1Q02413 1049 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 CAMK1Q14012 370 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 PRR23BQ6ZRT6 265 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 C2orf73Q8N5S3 287 aaPredicted RBP11.18□□□□□ -0.62
TRIM41-209ENST00000515834 OR8D1Q8WZ84 308 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 UROC1Q96N76 676 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 RABGEF1Q9UJ41 708 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 GNPTGQ9UJJ9 305 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 URADA6NGE7 173 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 TMEM88BA6NKF7 163 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 E5RJQ4 531 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 ACKR2O00590 384 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 TFPIP10646 304 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 SLC6A3Q01959 620 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 RSBN1Q5VWQ0 802 aaPredicted RBP11.18□□□□□ -0.62
TRIM41-209ENST00000515834 ZDHHC17Q8IUH5 632 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 FAM126BQ8IXS8 530 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 CCDC185Q8N715 623 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 ATP6V1C2Q8NEY4 427 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 ZNF606Q8WXB4 792 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 ARNTL2Q8WYA1 636 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 EXOC2Q96KP1 924 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 TTLL2Q9BWV7 592 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 PCDH12Q9NPG4 1184 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 SLC27A6Q9Y2P4 619 aa11.18□□□□□ -0.62
TRIM41-209ENST00000515834 SERPINH1P50454 418 aaKnown RBP11.17□□□□□ -0.62
TRIM41-209ENST00000515834 SEC24CP53992 1094 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 SPANXN3Q5MJ09 141 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 CELF3Q5SZQ8 465 aaKnown RBP11.17□□□□□ -0.62
TRIM41-209ENST00000515834 CDC73Q6P1J9 531 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 SLC26A11Q86WA9 606 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 CPA6Q8N4T0 437 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 LZTR1Q8N653 840 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 SELENOMQ8WWX9 145 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 IMP3Q9NV31 184 aaKnown RBP11.17□□□□□ -0.62
TRIM41-209ENST00000515834 CDH9Q9ULB4 789 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 NDUFAF1Q9Y375 327 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 CXCR2P25025 360 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 CRABP2P29373 138 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 IRF8Q02556 426 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRIM41-209ENST00000515834 GPR158Q5T848 1215 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 RBM43Q6ZSC3 357 aaKnown RBP11.17□□□□□ -0.62
TRIM41-209ENST00000515834 FAM220AQ7Z4H9 259 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 ARHGEF19Q8IW93 802 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 ELOA2Q8IYF1 753 aaPredicted RBP11.17□□□□□ -0.62
TRIM41-209ENST00000515834 TC2NQ8N9U0 490 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 C12orf50Q8NA57 414 aaPredicted RBP11.17□□□□□ -0.62
TRIM41-209ENST00000515834 ACTL9Q8TC94 416 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 FTHL17Q9BXU8 183 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 RHOBTB2Q9BYZ6 727 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 TMPRSS4Q9NRS4 437 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 ZNF624Q9P2J8 865 aaPredicted RBP11.17□□□□□ -0.62
TRIM41-209ENST00000515834 SH3GLB1Q9Y371 365 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 LRRC7Q96NW7 1537 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 F8VZ95 297 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 MYL12BO14950 172 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 TRIM24O15164 1050 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 RASGRP1O95267 797 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 TSPAN19P0C672 248 aa11.17□□□□□ -0.62
TRIM41-209ENST00000515834 FASTKQ14296 549 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms