RNA–Protein interactions for RNA: ENST00000513024.5

LIMCH1-218, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-218ENST00000513024 HPCAP84074 193 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 POU4F1Q01851 419 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 ZNF613Q6PF04 617 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 OTOAQ7RTW8 1153 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 TMC3Q7Z5M5 1100 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 ZNF467Q7Z7K2 595 aaPredicted RBP8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 ZSWIM2Q8NEG5 633 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 FAM136AQ96C01 138 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 OXNAD1Q96HP4 312 aaPredicted RBP8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 ISCA1Q9BUE6 129 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 KRCC1Q9NPI7 259 aaPredicted RBP8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 INTS10Q9NVR2 710 aaKnown RBP8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 POLR3BQ9NW08 1133 aaPredicted RBP8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 CROTQ9UKG9 612 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 REXO2Q9Y3B8 237 aaKnown RBP8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 SQORQ9Y6N5 450 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 CNTNAP5Q8WYK1 1306 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 BCLAF3A2AJT9 711 aaKnown RBP8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 GSAPA4D1B5 854 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 PIK3CDO00329 1044 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 ENTPD5O75356 428 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 IFNA7P01567 189 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 GRK3P35626 688 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 NPEPPSP55786 919 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 GNG2P59768 71 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 MRPS22P82650 360 aaKnown RBP8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 MTMR2Q13614 643 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 FIGNQ5HY92 759 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 CDKAL1Q5VV42 579 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 CYP4Z1Q86W10 505 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 SLC26A11Q86WA9 606 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 SLC5A5Q92911 643 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 VMP1Q96GC9 406 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 ART5Q96L15 291 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 CINPQ9BW66 212 aaPredicted RBP8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 MED28Q9H204 178 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 AGPAT3Q9NRZ7 376 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 POFUT2Q9Y2G5 429 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 OPLAHO14841 1288 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 TIMM44O43615 452 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 HMBSP08397 361 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 GSTM1P09488 218 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 ANPEPP15144 967 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 F8A1P23610 371 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 RBP5P82980 135 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 AGKQ53H12 422 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 PPP1R15BQ5SWA1 713 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 HS6ST3Q8IZP7 471 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 DCUN1D1Q96GG9 259 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 ZSCAN5AQ9BUG6 496 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 TBC1D10AQ9BXI6 508 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 UGT2B28Q9BY64 529 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 EPB41L4BQ9H329 900 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 RMND5AQ9H871 391 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 EIF3LQ9Y262 564 aaKnown RBP8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 TDRKHQ9Y2W6 561 aaKnown RBP8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 MYPNQ86TC9 1320 aa8.86□□□□□ -0.99
LIMCH1-218ENST00000513024 NR5A2O00482 541 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 MAP2K7O14733 419 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 TRIM3O75382 744 aaPredicted RBP8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 ITGA2BP08514 1039 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 RRM1P23921 792 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 CHKAP35790 457 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 KCNJ2P63252 427 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 FOLH1Q04609 750 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 CDC16Q13042 620 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 RIPK1Q13546 671 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 SAMD4BQ5PRF9 694 aaKnown RBP8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 DENND5BQ6ZUT9 1274 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 ADCK2Q7Z695 626 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 TCP10LQ8TDR4 215 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 AENQ8WTP8 325 aaKnown RBP8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 TEKT5Q96M29 485 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 RNF145Q96MT1 663 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 TLR10Q9BXR5 811 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 SEMA6BQ9H3T3 888 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 SAV1Q9H4B6 383 aaPredicted RBP8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 RIBC2Q9H4K1 309 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 GPAMQ9HCL2 828 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 ADAMTSL3P82987 1691 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 PSMD3O43242 534 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 CPA3P15088 417 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 PAICSP22234 425 aaKnown RBP8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 CENPAP49450 140 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 TOB1P50616 345 aaPredicted RBP8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 RAB27AP51159 221 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 PTENP60484 403 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 CREMQ03060 361 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 GALNTL6Q49A17 601 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 ANKS6Q68DC2 871 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 PTRHD1Q6GMV3 140 aaKnown RBP8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 XRRA1Q6P2D8 792 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 BPIFB6Q8NFQ5 453 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 SLC7A14Q8TBB6 771 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 CCDC126Q96EE4 140 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 SLC4A9Q96Q91 983 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 CDRT15Q96T59 188 aa8.85□□□□□ -0.99
LIMCH1-218ENST00000513024 MAP3K14Q99558 947 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms