RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 CAND1Q86VP6 1230 aaKnown RBP15.53■□□□□ 0.08
SCLT1-209ENST00000511426 PALM2Q8IXS6 379 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 HS6ST3Q8IZP7 471 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 BBS5Q8N3I7 341 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 ZNF557Q8N988 423 aaPredicted RBP15.53■□□□□ 0.08
SCLT1-209ENST00000511426 FBXO36Q8NEA4 188 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 HMCESQ96FZ2 354 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 PRICKLE1Q96MT3 831 aaPredicted RBP15.53■□□□□ 0.08
SCLT1-209ENST00000511426 PWWP2AQ96N64 755 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 SH3BP1Q9Y3L3 701 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 ZFP37Q9Y6Q3 630 aaPredicted RBP15.53■□□□□ 0.08
SCLT1-209ENST00000511426 DOCK4Q8N1I0 1966 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 GOLGA6L7A0A1B0GV03 622 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 A0A1W2PRU2 124 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 E2F8A0AVK6 867 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 A6NNZ2 444 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 AGTP01019 485 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 RHOP08100 348 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 WEE1P30291 646 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 CD68P34810 354 aaPredicted RBP15.52■□□□□ 0.08
SCLT1-209ENST00000511426 GEMP55040 296 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 CYP4F8P98187 520 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 GNA12Q03113 381 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 SLC14A2Q15849 920 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 TUBB8Q3ZCM7 444 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 FAXCQ5TGI0 409 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 EMC10Q5UCC4 262 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 MARC1Q5VT66 337 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 FAM109BQ6ICB4 259 aaPredicted RBP15.52■□□□□ 0.08
SCLT1-209ENST00000511426 ZNF534Q76KX8 674 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 CCDC117Q8IWD4 279 aaPredicted RBP15.52■□□□□ 0.08
SCLT1-209ENST00000511426 ARFGAP2Q8N6H7 521 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 PDCD7Q8N8D1 485 aaKnown RBP15.52■□□□□ 0.08
SCLT1-209ENST00000511426 MAB21L3Q8N8X9 362 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 ADAMTS19Q8TE59 1207 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 ARHGEF2Q92974 986 aaKnown RBP15.52■□□□□ 0.08
SCLT1-209ENST00000511426 AGAP3Q96P47 875 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 GLOD4Q9HC38 313 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 VPS45Q9NRW7 570 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 DNAJC17Q9NVM6 304 aaKnown RBP15.52■□□□□ 0.08
SCLT1-209ENST00000511426 SLC24A2Q9UI40 661 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 YBX2Q9Y2T7 364 aaKnown RBP15.52■□□□□ 0.08
SCLT1-209ENST00000511426 HCFC2Q9Y5Z7 792 aa15.52■□□□□ 0.08
SCLT1-209ENST00000511426 MKI67P46013 3256 aaKnown RBP15.51■□□□□ 0.07
SCLT1-209ENST00000511426 TRDMT1O14717 391 aaKnown RBP15.51■□□□□ 0.07
SCLT1-209ENST00000511426 PRAMEF11O60813 436 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 PEX11BO96011 259 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 SHBGP04278 402 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 IRF1P10914 325 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 NFKB1P19838 968 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 STX2P32856 288 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 AVPR1AP37288 418 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 IRAK1P51617 712 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 DUSP6Q16828 381 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 PPP2R2DQ66LE6 453 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 ZNF449Q6P9G9 518 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 CMTM8Q8IZV2 173 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 CNTD1Q8N815 330 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 OR2W6PQ8NHA6 318 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 FAM76AQ8TAV0 307 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 SHKBP1Q8TBC3 707 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 LRRN4Q8WUT4 740 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 DEPDC1BQ8WUY9 529 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 SLC22A12Q96S37 553 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 PBX4Q9BYU1 374 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 SLC25A51Q9H1U9 297 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 VPS37BQ9H9H4 285 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 DZANK1Q9NVP4 752 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 RBM22Q9NW64 420 aaKnown RBP eCLIP15.51■□□□□ 0.077e-6■■■■□ 24.6
SCLT1-209ENST00000511426 SMPD4Q9NXE4 827 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 DNMT3BQ9UBC3 853 aaKnown RBP15.51■□□□□ 0.07
SCLT1-209ENST00000511426 SDR42E2A6NKP2 422 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 CPP00450 1065 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 RHOCP08134 193 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 EPCAMP16422 314 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 BMP8BP34820 402 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 ELK3P41970 407 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 NR1H3Q13133 447 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 MPP3Q13368 585 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 FASTKD3Q14CZ7 662 aaKnown RBP15.51■□□□□ 0.07
SCLT1-209ENST00000511426 MSS51Q4VC12 460 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 GPR158Q5T848 1215 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 RFWD3Q6PCD5 774 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 C3orf62Q6ZUJ4 267 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 TAB3Q8N5C8 712 aaPredicted RBP15.51■□□□□ 0.07
SCLT1-209ENST00000511426 NETO2Q8NC67 525 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 CYP2S1Q96SQ9 504 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 EBNA1BP2Q99848 306 aaKnown RBP15.51■□□□□ 0.07
SCLT1-209ENST00000511426 ACSS3Q9H6R3 686 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 SLC28A3Q9HAS3 691 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 LGALS13Q9UHV8 139 aa15.51■□□□□ 0.07
SCLT1-209ENST00000511426 EXOC1LA0A1B0GW35 172 aa15.5■□□□□ 0.07
SCLT1-209ENST00000511426 MAGEB16A2A368 324 aa15.5■□□□□ 0.07
SCLT1-209ENST00000511426 CCDC85CA6NKD9 419 aa15.5■□□□□ 0.07
SCLT1-209ENST00000511426 RGS16O15492 202 aaPredicted RBP15.5■□□□□ 0.07
SCLT1-209ENST00000511426 RFPL2O75678 378 aa15.5■□□□□ 0.07
SCLT1-209ENST00000511426 NPY2RP49146 381 aa15.5■□□□□ 0.07
SCLT1-209ENST00000511426 GAD2Q05329 585 aa15.5■□□□□ 0.07
SCLT1-209ENST00000511426 MPPE1Q53F39 396 aa15.5■□□□□ 0.07
SCLT1-209ENST00000511426 TTMPQ5BVD1 217 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms